EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0025561 (Gene tree)
Gene ID: -
Gene Symbol: Zeb2
Alias: 9130203F04Rik|D130016B08Rik|SIP1|Sip1|Zfhx1b|Zfx1b|Zfxh1b
Full Name: zinc finger E-box binding homeobox 2
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 134659 bases
Position: chr2:41926210-42060868
Accession: 1344407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0054409	zf-C2H2	PF00096.26	1.8e-24	1	5
MGP_DBA2J_P0054409	zf-C2H2	PF00096.26	1.8e-24	2	5
MGP_DBA2J_P0054409	zf-C2H2	PF00096.26	1.8e-24	3	5
MGP_DBA2J_P0054409	zf-C2H2	PF00096.26	1.8e-24	4	5
MGP_DBA2J_P0054409	zf-C2H2	PF00096.26	1.8e-24	5	5
MGP_DBA2J_P0054411	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_DBA2J_P0054411	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_DBA2J_P0054411	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_DBA2J_P0054411	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_DBA2J_P0054411	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_DBA2J_P0054405	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_DBA2J_P0054405	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_DBA2J_P0054405	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_DBA2J_P0054405	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_DBA2J_P0054405	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_DBA2J_P0054408	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_DBA2J_P0054408	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_DBA2J_P0054408	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_DBA2J_P0054408	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_DBA2J_P0054408	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_DBA2J_P0054410	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_DBA2J_P0054410	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_DBA2J_P0054410	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_DBA2J_P0054410	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_DBA2J_P0054410	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_DBA2J_P0054407	zf-C2H2	PF00096.26	2.9e-24	1	5
MGP_DBA2J_P0054407	zf-C2H2	PF00096.26	2.9e-24	2	5
MGP_DBA2J_P0054407	zf-C2H2	PF00096.26	2.9e-24	3	5
MGP_DBA2J_P0054407	zf-C2H2	PF00096.26	2.9e-24	4	5
MGP_DBA2J_P0054407	zf-C2H2	PF00096.26	2.9e-24	5	5
MGP_DBA2J_P0054412	zf-C2H2	PF00096.26	1.2e-17	1	4
MGP_DBA2J_P0054412	zf-C2H2	PF00096.26	1.2e-17	2	4
MGP_DBA2J_P0054412	zf-C2H2	PF00096.26	1.2e-17	3	4
MGP_DBA2J_P0054412	zf-C2H2	PF00096.26	1.2e-17	4	4
MGP_DBA2J_P0054406	zf-C2H2	PF00096.26	1.2e-15	1	3
MGP_DBA2J_P0054406	zf-C2H2	PF00096.26	1.2e-15	2	3
MGP_DBA2J_P0054406	zf-C2H2	PF00096.26	1.2e-15	3	3
MGP_DBA2J_P0054409	zf-met	PF12874.7	1.4e-06	1	1
MGP_DBA2J_P0054411	zf-met	PF12874.7	1.7e-06	1	1
MGP_DBA2J_P0054405	zf-met	PF12874.7	1.7e-06	1	1
MGP_DBA2J_P0054408	zf-met	PF12874.7	1.7e-06	1	1
MGP_DBA2J_P0054410	zf-met	PF12874.7	1.7e-06	1	1
MGP_DBA2J_P0054407	zf-met	PF12874.7	2.3e-06	1	1
MGP_DBA2J_P0054412	zf-met	PF12874.7	5.8e-05	1	2
MGP_DBA2J_P0054412	zf-met	PF12874.7	5.8e-05	2	2
MGP_DBA2J_P0054406	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0054406	-	1762	-	MGP_DBA2J_P0054406	220 (aa)	-	-
MGP_DBA2J_T0054407	-	5334	-	MGP_DBA2J_P0054407	1259 (aa)	-	-
MGP_DBA2J_T0054405	-	9129	XM_006498042	MGP_DBA2J_P0054405	1215 (aa)	XP_006498105	Q9R0G7
MGP_DBA2J_T0054429	-	370	-	-	- (aa)	-	-
MGP_DBA2J_T0054420	-	2688	-	-	- (aa)	-	-
MGP_DBA2J_T0054421	-	2916	-	-	- (aa)	-	-
MGP_DBA2J_T0054422	-	550	-	MGP_DBA2J_P0054422	91 (aa)	-	-
MGP_DBA2J_T0054423	-	577	-	MGP_DBA2J_P0054423	63 (aa)	-	-
MGP_DBA2J_T0054424	-	462	-	MGP_DBA2J_P0054424	83 (aa)	-	-
MGP_DBA2J_T0054425	-	2068	-	MGP_DBA2J_P0054425	37 (aa)	-	-
MGP_DBA2J_T0054408	-	5623	-	MGP_DBA2J_P0054408	1215 (aa)	-	-
MGP_DBA2J_T0054409	-	4063	-	MGP_DBA2J_P0054409	1191 (aa)	-	-
MGP_DBA2J_T0054432	-	432	-	-	- (aa)	-	-
MGP_DBA2J_T0054415	-	709	-	MGP_DBA2J_P0054415	184 (aa)	-	-
MGP_DBA2J_T0054414	-	240	-	MGP_DBA2J_P0054414	79 (aa)	-	-
MGP_DBA2J_T0054417	-	631	-	MGP_DBA2J_P0054417	141 (aa)	-	-
MGP_DBA2J_T0054416	-	453	-	-	- (aa)	-	-
MGP_DBA2J_T0054411	-	3913	-	MGP_DBA2J_P0054411	1214 (aa)	-	-
MGP_DBA2J_T0054410	-	4020	-	MGP_DBA2J_P0054410	1215 (aa)	-	-
MGP_DBA2J_T0054413	-	868	-	MGP_DBA2J_P0054413	214 (aa)	-	-
MGP_DBA2J_T0054412	-	2236	-	MGP_DBA2J_P0054412	731 (aa)	-	-
MGP_DBA2J_T0054419	-	443	-	MGP_DBA2J_P0054419	113 (aa)	-	-
MGP_DBA2J_T0054418	-	618	-	-	- (aa)	-	-
MGP_DBA2J_T0054431	-	3837	-	-	- (aa)	-	-
MGP_DBA2J_T0054430	-	644	-	-	- (aa)	-	-
MGP_DBA2J_T0054426	-	2610	-	-	- (aa)	-	-
MGP_DBA2J_T0054427	-	2692	-	-	- (aa)	-	-
MGP_DBA2J_T0054428	-	2991	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0025561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0025561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0025561	Zeb2	97	62.150	MGP_DBA2J_G0023956	Zeb1	100	69.340