EuRBPDB

Description

Ensembl ID: MGP_DBA2J_G0025972 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 79709 bases
Position: chr2:88145347-88225055
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0055753	RRM_1	PF00076.22	4.1e-52	1	3
MGP_DBA2J_P0055753	RRM_1	PF00076.22	4.1e-52	2	3
MGP_DBA2J_P0055753	RRM_1	PF00076.22	4.1e-52	3	3
MGP_DBA2J_P0055747	RRM_1	PF00076.22	4.2e-52	1	3
MGP_DBA2J_P0055747	RRM_1	PF00076.22	4.2e-52	2	3
MGP_DBA2J_P0055747	RRM_1	PF00076.22	4.2e-52	3	3
MGP_DBA2J_P0055752	RRM_1	PF00076.22	5.2e-52	1	3
MGP_DBA2J_P0055752	RRM_1	PF00076.22	5.2e-52	2	3
MGP_DBA2J_P0055752	RRM_1	PF00076.22	5.2e-52	3	3
MGP_DBA2J_P0055750	RRM_1	PF00076.22	6.7e-52	1	3
MGP_DBA2J_P0055750	RRM_1	PF00076.22	6.7e-52	2	3
MGP_DBA2J_P0055750	RRM_1	PF00076.22	6.7e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0055754	-	486	-	-	- (aa)	-	-
MGP_DBA2J_T0055748	-	426	-	-	- (aa)	-	-
MGP_DBA2J_T0055749	-	478	-	-	- (aa)	-	-
MGP_DBA2J_T0055751	-	271	-	-	- (aa)	-	-
MGP_DBA2J_T0055750	-	7019	-	MGP_DBA2J_P0055750	543 (aa)	-	-
MGP_DBA2J_T0055753	-	4430	-	MGP_DBA2J_P0055753	483 (aa)	-	-
MGP_DBA2J_T0055752	-	7565	-	MGP_DBA2J_P0055752	513 (aa)	-	-
MGP_DBA2J_T0055746	-	350	-	-	- (aa)	-	-
MGP_DBA2J_T0055747	-	7837	-	MGP_DBA2J_P0055747	487 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0025972	Celf1	100	80.082	MGP_DBA2J_G0025176	Celf2	100	88.060
MGP_DBA2J_G0025972	Celf1	69	41.975	MGP_DBA2J_G0028258	Elavl2	85	41.975
MGP_DBA2J_G0025972	Celf1	57	43.590	MGP_DBA2J_G0034286	Elavl3	71	42.391
MGP_DBA2J_G0025972	Celf1	97	43.320	MGP_DBA2J_G0027374	Celf3	99	43.830
MGP_DBA2J_G0025972	Celf1	62	40.741	MGP_DBA2J_G0028389	Elavl4	78	40.741
MGP_DBA2J_G0025972	Celf1	70	38.636	MGP_DBA2J_G0028550	Pabpc4	68	33.333
MGP_DBA2J_G0025972	Celf1	61	45.679	MGP_DBA2J_G0033155	Elavl1	83	45.679
MGP_DBA2J_G0025972	Celf1	100	45.200	MGP_DBA2J_G0024042	Celf4	100	42.430
MGP_DBA2J_G0025972	Celf1	77	37.292	MGP_DBA2J_G0017401	Celf5	93	56.322
MGP_DBA2J_G0025972	Celf1	57	37.879	MGP_DBA2J_G0027016	Pabpc4l	65	34.211
MGP_DBA2J_G0025972	Celf1	98	45.135	MGP_DBA2J_G0034715	Celf6	91	45.549
MGP_DBA2J_G0025972	Celf1	53	43.421	MGP_DBA2J_G0035211	Rbms3	68	43.421
MGP_DBA2J_G0025972	Celf1	52	35.526	MGP_DBA2J_G0022975	Pabpc6	53	35.526