EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0026557 (Gene tree)
Gene ID: -
Gene Symbol: Raly
Alias: AI663842|Merc
Full Name: hnRNP-associated with lethal yellow
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 77687 bases
Position: chr2:152417787-152495473
Accession: 97850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0058241	RRM_1	PF00076.22	1.8e-12	1	1
MGP_DBA2J_P0058239	RRM_1	PF00076.22	3.8e-12	1	1
MGP_DBA2J_P0058238	RRM_1	PF00076.22	7.1e-12	1	1
MGP_DBA2J_P0058243	RRM_1	PF00076.22	7.1e-12	1	1
MGP_DBA2J_P0058244	RRM_1	PF00076.22	7.5e-12	1	1
MGP_DBA2J_P0058240	RRM_1	PF00076.22	8e-12	1	1
MGP_DBA2J_P0058242	RRM_1	PF00076.22	8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0058240	-	1759	-	MGP_DBA2J_P0058240	312 (aa)	-	-
MGP_DBA2J_T0058241	-	546	-	MGP_DBA2J_P0058241	141 (aa)	-	-
MGP_DBA2J_T0058242	-	1802	-	MGP_DBA2J_P0058242	312 (aa)	-	-
MGP_DBA2J_T0058243	-	1747	-	MGP_DBA2J_P0058243	296 (aa)	-	-
MGP_DBA2J_T0058244	-	1100	-	MGP_DBA2J_P0058244	298 (aa)	-	-
MGP_DBA2J_T0058245	-	1574	-	-	- (aa)	-	-
MGP_DBA2J_T0058246	-	402	-	-	- (aa)	-	-
MGP_DBA2J_T0058248	-	337	-	-	- (aa)	-	-
MGP_DBA2J_T0058239	-	851	-	MGP_DBA2J_P0058239	211 (aa)	-	-
MGP_DBA2J_T0058238	-	1709	XM_006499013	MGP_DBA2J_P0058238	296 (aa)	XP_006499076	Q64012

Gene Model

Click here to download MGP_DBA2J_G0026557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0026557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0026557	Raly	54	35.526	MGP_DBA2J_G0026645	Srsf6	56	35.526
MGP_DBA2J_G0026557	Raly	72	74.757	MGP_DBA2J_G0021119	Hnrnpc	67	53.043
MGP_DBA2J_G0026557	Raly	51	32.500	MGP_DBA2J_G0035549	Rbmx	77	32.500