EuRBPDB

Description

Ensembl ID: MGP_DBA2J_G0026592 (Gene tree)
Gene ID: -
Gene Symbol: Rbm39
Alias: 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|Caper|Caper alpha|R75070|Rnpc2|caper
Full Name: RNA binding motif protein 39
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 33299 bases
Position: chr2:153794089-153827387
Accession: 2157953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0058453	RRM_1	PF00076.22	1.2e-41	1	2
MGP_DBA2J_P0058453	RRM_1	PF00076.22	1.2e-41	2	2
MGP_DBA2J_P0058454	RRM_1	PF00076.22	1.7e-41	1	2
MGP_DBA2J_P0058454	RRM_1	PF00076.22	1.7e-41	2	2
MGP_DBA2J_P0058455	RRM_1	PF00076.22	1.7e-41	1	2
MGP_DBA2J_P0058455	RRM_1	PF00076.22	1.7e-41	2	2
MGP_DBA2J_P0058459	RRM_1	PF00076.22	2.2e-22	1	1
MGP_DBA2J_P0058460	RRM_1	PF00076.22	9.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0058460	-	1090	-	MGP_DBA2J_P0058460	273 (aa)	-	-
MGP_DBA2J_T0058461	-	695	-	-	- (aa)	-	-
MGP_DBA2J_T0058462	-	546	-	-	- (aa)	-	-
MGP_DBA2J_T0058463	-	1456	-	-	- (aa)	-	-
MGP_DBA2J_T0058464	-	754	-	MGP_DBA2J_P0058464	156 (aa)	-	-
MGP_DBA2J_T0058465	-	497	-	-	- (aa)	-	-
MGP_DBA2J_T0058466	-	711	-	-	- (aa)	-	-
MGP_DBA2J_T0058467	-	685	-	-	- (aa)	-	-
MGP_DBA2J_T0058468	-	707	-	MGP_DBA2J_P0058468	40 (aa)	-	-
MGP_DBA2J_T0058469	-	593	-	MGP_DBA2J_P0058469	39 (aa)	-	-
MGP_DBA2J_T0058459	-	931	-	MGP_DBA2J_P0058459	310 (aa)	-	-
MGP_DBA2J_T0058458	-	2127	-	MGP_DBA2J_P0058458	47 (aa)	-	-
MGP_DBA2J_T0058455	-	2711	-	MGP_DBA2J_P0058455	524 (aa)	-	-
MGP_DBA2J_T0058454	-	2580	-	MGP_DBA2J_P0058454	524 (aa)	-	-
MGP_DBA2J_T0058457	-	2120	-	MGP_DBA2J_P0058457	40 (aa)	-	-
MGP_DBA2J_T0058456	-	2744	-	MGP_DBA2J_P0058456	415 (aa)	-	-
MGP_DBA2J_T0058453	-	2810	XM_006498832	MGP_DBA2J_P0058453	530 (aa)	XP_006498895	Q8VH51
MGP_DBA2J_T0058477	-	715	-	-	- (aa)	-	-
MGP_DBA2J_T0058476	-	1008	-	-	- (aa)	-	-
MGP_DBA2J_T0058475	-	699	-	MGP_DBA2J_P0058475	40 (aa)	-	-
MGP_DBA2J_T0058474	-	672	-	-	- (aa)	-	-
MGP_DBA2J_T0058473	-	667	-	MGP_DBA2J_P0058473	38 (aa)	-	-
MGP_DBA2J_T0058472	-	743	-	MGP_DBA2J_P0058472	40 (aa)	-	-
MGP_DBA2J_T0058471	-	585	-	MGP_DBA2J_P0058471	62 (aa)	-	-
MGP_DBA2J_T0058470	-	707	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0026592	Rbm39	52	34.483	MGP_DBA2J_G0017333	Dazap1	94	34.483