EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0026738 (Gene tree)
Gene ID: -
Gene Symbol: Stau1
Alias: 5830401L18Rik|AW549911|C85792|Stau
Full Name: staufen (RNA binding protein) homolog 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 49162 bases
Position: chr2:164672062-164721223
Accession: 1338864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0059104	dsrm	PF00035.26	1.2e-26	1	2
MGP_DBA2J_P0059104	dsrm	PF00035.26	1.2e-26	2	2
MGP_DBA2J_P0059101	dsrm	PF00035.26	1.2e-26	1	2
MGP_DBA2J_P0059101	dsrm	PF00035.26	1.2e-26	2	2
MGP_DBA2J_P0059105	dsrm	PF00035.26	1.4e-26	1	2
MGP_DBA2J_P0059105	dsrm	PF00035.26	1.4e-26	2	2
MGP_DBA2J_P0059103	dsrm	PF00035.26	2.3e-23	1	2
MGP_DBA2J_P0059103	dsrm	PF00035.26	2.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0059104	-	2840	-	MGP_DBA2J_P0059104	485 (aa)	-	-
MGP_DBA2J_T0059105	-	2860	-	MGP_DBA2J_P0059105	487 (aa)	-	-
MGP_DBA2J_T0059106	-	774	-	-	- (aa)	-	-
MGP_DBA2J_T0059107	-	1513	-	MGP_DBA2J_P0059107	436 (aa)	-	-
MGP_DBA2J_T0059101	-	3569	XM_006499071	MGP_DBA2J_P0059101	489 (aa)	XP_006499134	Q9Z108
MGP_DBA2J_T0059102	-	3573	-	-	- (aa)	-	-
MGP_DBA2J_T0059103	-	2976	-	MGP_DBA2J_P0059103	495 (aa)	-	-
MGP_DBA2J_T0059111	-	341	-	-	- (aa)	-	-
MGP_DBA2J_T0059110	-	788	-	-	- (aa)	-	-
MGP_DBA2J_T0059108	-	862	-	-	- (aa)	-	-
MGP_DBA2J_T0059109	-	826	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0026738's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0026738's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0026738	Stau1	52	31.395	MGP_DBA2J_G0025710	Prkra	53	31.395
MGP_DBA2J_G0026738	Stau1	86	48.055	MGP_DBA2J_G0015698	Stau2	85	48.046