EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0026851 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 7756 bases
Position: chr2:179307391-179315146
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0059590	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0059588	-	1822	-	-	- (aa)	-	-
MGP_DBA2J_T0059589	-	1087	-	-	- (aa)	-	-
MGP_DBA2J_T0059595	-	555	-	-	- (aa)	-	-
MGP_DBA2J_T0059594	-	434	-	-	- (aa)	-	-
MGP_DBA2J_T0059593	-	662	-	MGP_DBA2J_P0059593	62 (aa)	-	-
MGP_DBA2J_T0059592	-	748	-	-	- (aa)	-	-
MGP_DBA2J_T0059591	-	835	-	-	- (aa)	-	-
MGP_DBA2J_T0059590	-	644	-	MGP_DBA2J_P0059590	201 (aa)	-	-
MGP_DBA2J_T0059586	-	2318	XM_011239965	MGP_DBA2J_P0059586	121 (aa)	XP_011238267	Q8BXL7
MGP_DBA2J_T0059587	-	2179	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0026851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0026851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0026851	Arfrp1	85	34.286	MGP_DBA2J_G0016133	Arl4c	86	34.286
MGP_DBA2J_G0026851	Arfrp1	92	40.000	MGP_DBA2J_G0025054	Arl3	96	40.000
MGP_DBA2J_G0026851	Arfrp1	93	31.304	MGP_DBA2J_G0030921	Arl8b	74	31.724
MGP_DBA2J_G0026851	Arfrp1	87	35.185	MGP_DBA2J_G0029788	Rab35	59	32.576
MGP_DBA2J_G0026851	Arfrp1	93	40.708	MGP_DBA2J_G0018880	Arl5c	96	37.705
MGP_DBA2J_G0026851	Arfrp1	84	35.577	MGP_DBA2J_G0027122	Arl14	83	34.911
MGP_DBA2J_G0026851	Arfrp1	91	40.000	MGP_DBA2J_G0019532	Arl4a	90	34.896
MGP_DBA2J_G0026851	Arfrp1	87	32.222	MGP_DBA2J_G0019042	Arl4d	85	32.222
MGP_DBA2J_G0026851	Arfrp1	93	33.929	MGP_DBA2J_G0022767	Arl6	92	30.387
MGP_DBA2J_G0026851	Arfrp1	90	38.393	MGP_DBA2J_G0030326	Arf5	94	34.225
MGP_DBA2J_G0026851	Arfrp1	93	38.793	MGP_DBA2J_G0019103	Arf2	96	33.333
MGP_DBA2J_G0026851	Arfrp1	93	37.931	MGP_DBA2J_G0022137	Arf3	96	33.333
MGP_DBA2J_G0026851	Arfrp1	91	38.182	MGP_DBA2J_G0024584	Arl2	97	35.106
MGP_DBA2J_G0026851	Arfrp1	71	30.070	MGP_DBA2J_G0016365	Arl8a	73	30.070
MGP_DBA2J_G0026851	Arfrp1	87	37.273	MGP_DBA2J_G0021271	Arl11	94	34.659
MGP_DBA2J_G0026851	Arfrp1	93	38.938	MGP_DBA2J_G0025577	Arl5a	97	38.587
MGP_DBA2J_G0026851	Arfrp1	85	36.416	MGP_DBA2J_G0017471	Arl1	97	34.921
MGP_DBA2J_G0026851	Arfrp1	84	40.196	MGP_DBA2J_G0025210	Arl5b	92	37.126