EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0027374 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 14035 bases
Position: chr3:91429619-91443653
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0061939	RRM_1	PF00076.22	9.3e-54	1	3
MGP_DBA2J_P0061939	RRM_1	PF00076.22	9.3e-54	2	3
MGP_DBA2J_P0061939	RRM_1	PF00076.22	9.3e-54	3	3
MGP_DBA2J_P0061938	RRM_1	PF00076.22	1.5e-53	1	3
MGP_DBA2J_P0061938	RRM_1	PF00076.22	1.5e-53	2	3
MGP_DBA2J_P0061938	RRM_1	PF00076.22	1.5e-53	3	3
MGP_DBA2J_P0061940	RRM_1	PF00076.22	2e-53	1	3
MGP_DBA2J_P0061940	RRM_1	PF00076.22	2e-53	2	3
MGP_DBA2J_P0061940	RRM_1	PF00076.22	2e-53	3	3
MGP_DBA2J_P0061945	RRM_1	PF00076.22	6.9e-16	1	1
MGP_DBA2J_P0061946	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0061949	-	855	-	-	- (aa)	-	-
MGP_DBA2J_T0061948	-	889	-	-	- (aa)	-	-
MGP_DBA2J_T0061938	-	2742	-	MGP_DBA2J_P0061938	465 (aa)	-	-
MGP_DBA2J_T0061939	-	2349	-	MGP_DBA2J_P0061939	416 (aa)	-	-
MGP_DBA2J_T0061943	-	2439	-	-	- (aa)	-	-
MGP_DBA2J_T0061937	-	320	XM_006502323	MGP_DBA2J_P0061937	31 (aa)	XP_006502386	Q8CIN6
MGP_DBA2J_T0061941	-	1193	-	-	- (aa)	-	-
MGP_DBA2J_T0061940	-	4084	-	MGP_DBA2J_P0061940	494 (aa)	-	-
MGP_DBA2J_T0061947	-	3363	-	-	- (aa)	-	-
MGP_DBA2J_T0061946	-	726	-	MGP_DBA2J_P0061946	231 (aa)	-	-
MGP_DBA2J_T0061945	-	779	-	MGP_DBA2J_P0061945	182 (aa)	-	-
MGP_DBA2J_T0061944	-	2930	-	-	- (aa)	-	-
MGP_DBA2J_T0061942	-	669	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0027374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0027374's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0027374	Celf3	61	40.741	MGP_DBA2J_G0028389	Elavl4	85	40.741
MGP_DBA2J_G0027374	Celf3	77	37.805	MGP_DBA2J_G0030794	Tia1	93	38.667
MGP_DBA2J_G0027374	Celf3	69	33.784	MGP_DBA2J_G0028550	Pabpc4	67	32.394
MGP_DBA2J_G0027374	Celf3	67	32.857	MGP_DBA2J_G0026666	Pabpc1l	57	34.118
MGP_DBA2J_G0027374	Celf3	98	35.632	MGP_DBA2J_G0033155	Elavl1	95	44.444
MGP_DBA2J_G0027374	Celf3	81	87.368	MGP_DBA2J_G0034715	Celf6	75	85.526
MGP_DBA2J_G0027374	Celf3	99	43.830	MGP_DBA2J_G0025972	Celf1	97	43.320
MGP_DBA2J_G0027374	Celf3	63	41.975	MGP_DBA2J_G0028258	Elavl2	76	41.975
MGP_DBA2J_G0027374	Celf3	90	55.801	MGP_DBA2J_G0025176	Celf2	94	83.333
MGP_DBA2J_G0027374	Celf3	98	35.632	MGP_DBA2J_G0034286	Elavl3	89	34.940
MGP_DBA2J_G0027374	Celf3	100	69.072	MGP_DBA2J_G0024042	Celf4	100	63.275
MGP_DBA2J_G0027374	Celf3	91	39.474	MGP_DBA2J_G0035211	Rbms3	76	39.474
MGP_DBA2J_G0027374	Celf3	70	34.091	MGP_DBA2J_G0032905	Tial1	81	37.333
MGP_DBA2J_G0027374	Celf3	80	37.500	MGP_DBA2J_G0022975	Pabpc6	72	36.585
MGP_DBA2J_G0027374	Celf3	100	67.213	MGP_DBA2J_G0017401	Celf5	93	76.744