EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0027643 (Gene tree)
Gene ID: -
Gene Symbol: Ptbp2
Alias: Brptb|Nptb|Ptb2|brPTB|nPTB
Full Name: polypyrimidine tract binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 66465 bases
Position: chr3:116985783-117052247
Accession: 1860489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0063163	RRM_5	PF13893.6	3.4e-53	1	3
MGP_DBA2J_P0063163	RRM_5	PF13893.6	3.4e-53	2	3
MGP_DBA2J_P0063163	RRM_5	PF13893.6	3.4e-53	3	3
MGP_DBA2J_P0063164	RRM_5	PF13893.6	4e-52	1	2
MGP_DBA2J_P0063164	RRM_5	PF13893.6	4e-52	2	2
MGP_DBA2J_P0063169	RRM_5	PF13893.6	3.4e-20	1	1
MGP_DBA2J_P0063164	RRM_1	PF00076.22	5.9e-33	1	3
MGP_DBA2J_P0063164	RRM_1	PF00076.22	5.9e-33	2	3
MGP_DBA2J_P0063164	RRM_1	PF00076.22	5.9e-33	3	3
MGP_DBA2J_P0063163	RRM_1	PF00076.22	2e-32	1	3
MGP_DBA2J_P0063163	RRM_1	PF00076.22	2e-32	2	3
MGP_DBA2J_P0063163	RRM_1	PF00076.22	2e-32	3	3
MGP_DBA2J_P0063171	RRM_1	PF00076.22	2.5e-10	1	1
MGP_DBA2J_P0063169	RRM_1	PF00076.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0063170	-	4047	-	-	- (aa)	-	-
MGP_DBA2J_T0063171	-	1742	-	MGP_DBA2J_P0063171	241 (aa)	-	-
MGP_DBA2J_T0063172	-	654	-	-	- (aa)	-	-
MGP_DBA2J_T0063173	-	478	-	-	- (aa)	-	-
MGP_DBA2J_T0063167	-	937	-	-	- (aa)	-	-
MGP_DBA2J_T0063166	-	576	-	MGP_DBA2J_P0063166	33 (aa)	-	-
MGP_DBA2J_T0063165	-	1598	-	MGP_DBA2J_P0063165	356 (aa)	-	-
MGP_DBA2J_T0063164	-	3774	-	MGP_DBA2J_P0063164	531 (aa)	-	-
MGP_DBA2J_T0063163	-	3365	XM_006501731	MGP_DBA2J_P0063163	532 (aa)	XP_006501794	Q91Z31
MGP_DBA2J_T0063175	-	389	-	MGP_DBA2J_P0063175	49 (aa)	-	-
MGP_DBA2J_T0063174	-	454	-	-	- (aa)	-	-
MGP_DBA2J_T0063169	-	465	-	MGP_DBA2J_P0063169	155 (aa)	-	-
MGP_DBA2J_T0063168	-	491	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0027643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0027643's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0027643	Ptbp2	100	72.903	MGP_DBA2J_G0017304	Ptbp1	100	73.048
MGP_DBA2J_G0027643	Ptbp2	99	30.357	MGP_DBA2J_G0023881	Hnrnpll	57	30.000
MGP_DBA2J_G0027643	Ptbp2	99	69.835	MGP_DBA2J_G0028152	Ptbp3	91	78.195
MGP_DBA2J_G0027643	Ptbp2	77	30.645	MGP_DBA2J_G0031784	Hnrnpl	77	30.645