EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0027804 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 26418 bases
Position: chr3:149509818-149536235
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0064034	KH_1	PF00013.29	7.1e-70	1	4
MGP_DBA2J_P0064034	KH_1	PF00013.29	7.1e-70	2	4
MGP_DBA2J_P0064034	KH_1	PF00013.29	7.1e-70	3	4
MGP_DBA2J_P0064034	KH_1	PF00013.29	7.1e-70	4	4
MGP_DBA2J_P0064031	KH_1	PF00013.29	2.2e-69	1	4
MGP_DBA2J_P0064031	KH_1	PF00013.29	2.2e-69	2	4
MGP_DBA2J_P0064031	KH_1	PF00013.29	2.2e-69	3	4
MGP_DBA2J_P0064031	KH_1	PF00013.29	2.2e-69	4	4
MGP_DBA2J_P0064038	KH_1	PF00013.29	2.2e-69	1	4
MGP_DBA2J_P0064038	KH_1	PF00013.29	2.2e-69	2	4
MGP_DBA2J_P0064038	KH_1	PF00013.29	2.2e-69	3	4
MGP_DBA2J_P0064038	KH_1	PF00013.29	2.2e-69	4	4
MGP_DBA2J_P0064035	KH_1	PF00013.29	2.4e-69	1	4
MGP_DBA2J_P0064035	KH_1	PF00013.29	2.4e-69	2	4
MGP_DBA2J_P0064035	KH_1	PF00013.29	2.4e-69	3	4
MGP_DBA2J_P0064035	KH_1	PF00013.29	2.4e-69	4	4
MGP_DBA2J_P0064033	KH_1	PF00013.29	2.4e-69	1	4
MGP_DBA2J_P0064033	KH_1	PF00013.29	2.4e-69	2	4
MGP_DBA2J_P0064033	KH_1	PF00013.29	2.4e-69	3	4
MGP_DBA2J_P0064033	KH_1	PF00013.29	2.4e-69	4	4
MGP_DBA2J_P0064032	KH_1	PF00013.29	7.6e-38	1	2
MGP_DBA2J_P0064032	KH_1	PF00013.29	7.6e-38	2	2
MGP_DBA2J_P0064041	KH_1	PF00013.29	1.1e-16	1	1
MGP_DBA2J_P0064034	KH_2	PF07650.17	1.3e-22	1	2
MGP_DBA2J_P0064034	KH_2	PF07650.17	1.3e-22	2	2
MGP_DBA2J_P0064038	KH_2	PF07650.17	3.3e-22	1	2
MGP_DBA2J_P0064038	KH_2	PF07650.17	3.3e-22	2	2
MGP_DBA2J_P0064035	KH_2	PF07650.17	3.5e-22	1	2
MGP_DBA2J_P0064035	KH_2	PF07650.17	3.5e-22	2	2
MGP_DBA2J_P0064033	KH_2	PF07650.17	3.6e-22	1	2
MGP_DBA2J_P0064033	KH_2	PF07650.17	3.6e-22	2	2
MGP_DBA2J_P0064031	KH_2	PF07650.17	3.7e-22	1	2
MGP_DBA2J_P0064031	KH_2	PF07650.17	3.7e-22	2	2
MGP_DBA2J_P0064032	KH_2	PF07650.17	3.8e-10	1	1
MGP_DBA2J_P0064041	KH_2	PF07650.17	5.2e-06	1	1
MGP_DBA2J_P0064045	DUF1897	PF09005.10	1.7e-12	1	2
MGP_DBA2J_P0064045	DUF1897	PF09005.10	1.7e-12	2	2
MGP_DBA2J_P0064043	DUF1897	PF09005.10	2.1e-12	1	2
MGP_DBA2J_P0064043	DUF1897	PF09005.10	2.1e-12	2	2
MGP_DBA2J_P0064031	DUF1897	PF09005.10	2.4e-11	1	2
MGP_DBA2J_P0064031	DUF1897	PF09005.10	2.4e-11	2	2
MGP_DBA2J_P0064038	DUF1897	PF09005.10	2.4e-11	1	2
MGP_DBA2J_P0064038	DUF1897	PF09005.10	2.4e-11	2	2
MGP_DBA2J_P0064035	DUF1897	PF09005.10	2.5e-11	1	2
MGP_DBA2J_P0064035	DUF1897	PF09005.10	2.5e-11	2	2
MGP_DBA2J_P0064033	DUF1897	PF09005.10	2.6e-11	1	2
MGP_DBA2J_P0064033	DUF1897	PF09005.10	2.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0064049	-	665	-	-	- (aa)	-	-
MGP_DBA2J_T0064041	-	585	-	MGP_DBA2J_P0064041	149 (aa)	-	-
MGP_DBA2J_T0064040	-	432	-	-	- (aa)	-	-
MGP_DBA2J_T0064034	-	3163	-	MGP_DBA2J_P0064034	523 (aa)	-	-
MGP_DBA2J_T0064035	-	2526	-	MGP_DBA2J_P0064035	651 (aa)	-	-
MGP_DBA2J_T0064036	-	2087	-	MGP_DBA2J_P0064036	69 (aa)	-	-
MGP_DBA2J_T0064037	-	4846	-	MGP_DBA2J_P0064037	700 (aa)	-	-
MGP_DBA2J_T0064048	-	3994	-	-	- (aa)	-	-
MGP_DBA2J_T0064031	-	6523	XM_006501660	MGP_DBA2J_P0064031	642 (aa)	XP_006501723	Q91WJ8
MGP_DBA2J_T0064032	-	1040	-	MGP_DBA2J_P0064032	306 (aa)	-	-
MGP_DBA2J_T0064033	-	2552	-	MGP_DBA2J_P0064033	654 (aa)	-	-
MGP_DBA2J_T0064045	-	809	-	MGP_DBA2J_P0064045	156 (aa)	-	-
MGP_DBA2J_T0064044	-	800	-	MGP_DBA2J_P0064044	173 (aa)	-	-
MGP_DBA2J_T0064047	-	424	-	-	- (aa)	-	-
MGP_DBA2J_T0064046	-	5099	-	-	- (aa)	-	-
MGP_DBA2J_T0064038	-	2374	-	MGP_DBA2J_P0064038	643 (aa)	-	-
MGP_DBA2J_T0064039	-	4525	-	MGP_DBA2J_P0064039	642 (aa)	-	-
MGP_DBA2J_T0064043	-	796	-	MGP_DBA2J_P0064043	141 (aa)	-	-
MGP_DBA2J_T0064042	-	512	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0027804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0027804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0027804	Fubp1	72	33.019	MGP_DBA2J_G0017228	Pcbp3	66	31.250
MGP_DBA2J_G0027804	Fubp1	53	36.923	MGP_DBA2J_G0020465	Hnrnpk	55	36.923
MGP_DBA2J_G0027804	Fubp1	72	34.524	MGP_DBA2J_G0035044	Pcbp4	76	33.684
MGP_DBA2J_G0027804	Fubp1	50	36.364	MGP_DBA2J_G0019545	Nova1	57	36.364
MGP_DBA2J_G0027804	Fubp1	94	59.208	MGP_DBA2J_G0025431	Fubp3	96	64.324
MGP_DBA2J_G0027804	Fubp1	61	36.765	MGP_DBA2J_G0031568	-	55	36.765
MGP_DBA2J_G0027804	Fubp1	61	36.765	MGP_DBA2J_G0031569	Nova2	54	36.765
MGP_DBA2J_G0027804	Fubp1	96	64.410	MGP_DBA2J_G0023776	Khsrp	70	67.654