EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0028258 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 156805 bases
Position: chr4:87763246-87920050
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0066036	RRM_5	PF13893.6	1.3e-12	1	2
MGP_DBA2J_P0066036	RRM_5	PF13893.6	1.3e-12	2	2
MGP_DBA2J_P0066037	RRM_5	PF13893.6	1.4e-12	1	2
MGP_DBA2J_P0066037	RRM_5	PF13893.6	1.4e-12	2	2
MGP_DBA2J_P0066034	RRM_5	PF13893.6	1.7e-12	1	2
MGP_DBA2J_P0066034	RRM_5	PF13893.6	1.7e-12	2	2
MGP_DBA2J_P0066035	RRM_5	PF13893.6	1.9e-12	1	2
MGP_DBA2J_P0066035	RRM_5	PF13893.6	1.9e-12	2	2
MGP_DBA2J_P0066039	RRM_5	PF13893.6	2.1e-12	1	2
MGP_DBA2J_P0066039	RRM_5	PF13893.6	2.1e-12	2	2
MGP_DBA2J_P0066040	RRM_5	PF13893.6	2.2e-12	1	2
MGP_DBA2J_P0066040	RRM_5	PF13893.6	2.2e-12	2	2
MGP_DBA2J_P0066036	RRM_1	PF00076.22	1.2e-66	1	3
MGP_DBA2J_P0066036	RRM_1	PF00076.22	1.2e-66	2	3
MGP_DBA2J_P0066036	RRM_1	PF00076.22	1.2e-66	3	3
MGP_DBA2J_P0066037	RRM_1	PF00076.22	1.4e-66	1	3
MGP_DBA2J_P0066037	RRM_1	PF00076.22	1.4e-66	2	3
MGP_DBA2J_P0066037	RRM_1	PF00076.22	1.4e-66	3	3
MGP_DBA2J_P0066034	RRM_1	PF00076.22	1.6e-66	1	3
MGP_DBA2J_P0066034	RRM_1	PF00076.22	1.6e-66	2	3
MGP_DBA2J_P0066034	RRM_1	PF00076.22	1.6e-66	3	3
MGP_DBA2J_P0066035	RRM_1	PF00076.22	1.7e-66	1	3
MGP_DBA2J_P0066035	RRM_1	PF00076.22	1.7e-66	2	3
MGP_DBA2J_P0066035	RRM_1	PF00076.22	1.7e-66	3	3
MGP_DBA2J_P0066040	RRM_1	PF00076.22	2e-66	1	3
MGP_DBA2J_P0066040	RRM_1	PF00076.22	2e-66	2	3
MGP_DBA2J_P0066040	RRM_1	PF00076.22	2e-66	3	3
MGP_DBA2J_P0066039	RRM_1	PF00076.22	2e-66	1	3
MGP_DBA2J_P0066039	RRM_1	PF00076.22	2e-66	2	3
MGP_DBA2J_P0066039	RRM_1	PF00076.22	2e-66	3	3
MGP_DBA2J_P0066042	RRM_1	PF00076.22	7.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0066036	-	3671	-	MGP_DBA2J_P0066036	347 (aa)	-	-
MGP_DBA2J_T0066037	-	3730	-	MGP_DBA2J_P0066037	360 (aa)	-	-
MGP_DBA2J_T0066034	-	3840	XM_006502778	MGP_DBA2J_P0066034	373 (aa)	XP_006502841	Q60899
MGP_DBA2J_T0066035	-	3797	-	MGP_DBA2J_P0066035	376 (aa)	-	-
MGP_DBA2J_T0066038	-	930	-	-	- (aa)	-	-
MGP_DBA2J_T0066039	-	1282	-	MGP_DBA2J_P0066039	389 (aa)	-	-
MGP_DBA2J_T0066046	-	415	-	-	- (aa)	-	-
MGP_DBA2J_T0066045	-	450	-	-	- (aa)	-	-
MGP_DBA2J_T0066044	-	511	-	MGP_DBA2J_P0066044	23 (aa)	-	-
MGP_DBA2J_T0066043	-	408	-	MGP_DBA2J_P0066043	83 (aa)	-	-
MGP_DBA2J_T0066042	-	425	-	MGP_DBA2J_P0066042	125 (aa)	-	-
MGP_DBA2J_T0066041	-	3195	-	-	- (aa)	-	-
MGP_DBA2J_T0066040	-	1167	-	MGP_DBA2J_P0066040	388 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0028258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0028258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0028258	Elavl2	72	32.632	MGP_DBA2J_G0018758	Msi2	70	31.250
MGP_DBA2J_G0028258	Elavl2	89	34.940	MGP_DBA2J_G0028550	Pabpc4	98	35.294
MGP_DBA2J_G0028258	Elavl2	92	34.940	MGP_DBA2J_G0026666	Pabpc1l	64	34.940
MGP_DBA2J_G0028258	Elavl2	89	36.145	MGP_DBA2J_G0024202	Pabpc2	59	36.145
MGP_DBA2J_G0028258	Elavl2	89	34.940	MGP_DBA2J_G0027016	Pabpc4l	96	34.940
MGP_DBA2J_G0028258	Elavl2	58	31.169	MGP_DBA2J_G0029593	Hnrnpd	70	32.000
MGP_DBA2J_G0028258	Elavl2	88	39.506	MGP_DBA2J_G0024042	Celf4	91	37.037
MGP_DBA2J_G0028258	Elavl2	64	37.500	MGP_DBA2J_G0017327	Cirbp	76	37.500
MGP_DBA2J_G0028258	Elavl2	89	76.375	MGP_DBA2J_G0033155	Elavl1	94	76.375
MGP_DBA2J_G0028258	Elavl2	93	34.615	MGP_DBA2J_G0032905	Tial1	72	34.615
MGP_DBA2J_G0028258	Elavl2	85	41.975	MGP_DBA2J_G0025972	Celf1	69	41.975
MGP_DBA2J_G0028258	Elavl2	90	37.349	MGP_DBA2J_G0022975	Pabpc6	60	37.349
MGP_DBA2J_G0028258	Elavl2	59	33.784	MGP_DBA2J_G0016685	Rbm8a2	58	32.353
MGP_DBA2J_G0028258	Elavl2	96	34.615	MGP_DBA2J_G0030794	Tia1	89	34.615
MGP_DBA2J_G0028258	Elavl2	69	37.209	MGP_DBA2J_G0035211	Rbms3	83	37.222
MGP_DBA2J_G0028258	Elavl2	67	35.714	MGP_DBA2J_G0029910	Snrnp35	60	37.500
MGP_DBA2J_G0028258	Elavl2	100	89.751	MGP_DBA2J_G0028389	Elavl4	99	89.315
MGP_DBA2J_G0028258	Elavl2	60	41.558	MGP_DBA2J_G0025607	Rbms1	51	37.209
MGP_DBA2J_G0028258	Elavl2	100	79.292	MGP_DBA2J_G0034286	Elavl3	100	78.400
MGP_DBA2J_G0028258	Elavl2	59	33.784	MGP_DBA2J_G0027446	Rbm8a	58	32.353
MGP_DBA2J_G0028258	Elavl2	63	32.911	MGP_DBA2J_G0035350	Rbm3	82	38.710
MGP_DBA2J_G0028258	Elavl2	76	41.975	MGP_DBA2J_G0027374	Celf3	63	41.975
MGP_DBA2J_G0028258	Elavl2	78	40.741	MGP_DBA2J_G0034715	Celf6	89	37.037
MGP_DBA2J_G0028258	Elavl2	89	37.037	MGP_DBA2J_G0035849	Pabpc5	94	37.037
MGP_DBA2J_G0028258	Elavl2	66	30.952	MGP_DBA2J_G0028679	Trnau1ap	98	30.952
MGP_DBA2J_G0028258	Elavl2	73	34.831	MGP_DBA2J_G0035549	Rbmx	86	34.831
MGP_DBA2J_G0028258	Elavl2	83	39.506	MGP_DBA2J_G0025176	Celf2	87	33.333
MGP_DBA2J_G0028258	Elavl2	89	37.349	MGP_DBA2J_G0021631	Pabpc1	58	37.349