EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0028368 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc11
Alias: 6030404K05Rik|9230115F04Rik|Kiaa0191|PPAPD3|Tut4|mKIAA0191
Full Name: zinc finger%2C CCHC domain containing 11
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 99290 bases
Position: chr4:104903163-105002452
Accession: 2445126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0066567	zf-CCHC	PF00098.23	7.9e-11	1	2
MGP_DBA2J_P0066567	zf-CCHC	PF00098.23	7.9e-11	2	2
MGP_DBA2J_P0066569	zf-CCHC	PF00098.23	8e-11	1	2
MGP_DBA2J_P0066569	zf-CCHC	PF00098.23	8e-11	2	2
MGP_DBA2J_P0066567	PAP_assoc	PF03828.19	3.4e-28	1	2
MGP_DBA2J_P0066567	PAP_assoc	PF03828.19	3.4e-28	2	2
MGP_DBA2J_P0066569	PAP_assoc	PF03828.19	3.8e-28	1	2
MGP_DBA2J_P0066569	PAP_assoc	PF03828.19	3.8e-28	2	2
MGP_DBA2J_P0066570	PAP_assoc	PF03828.19	4.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0066573	-	567	-	-	- (aa)	-	-
MGP_DBA2J_T0066572	-	541	-	-	- (aa)	-	-
MGP_DBA2J_T0066571	-	636	-	-	- (aa)	-	-
MGP_DBA2J_T0066570	-	3283	-	MGP_DBA2J_P0066570	1006 (aa)	-	-
MGP_DBA2J_T0066577	-	587	-	MGP_DBA2J_P0066577	105 (aa)	-	-
MGP_DBA2J_T0066576	-	2473	-	-	- (aa)	-	-
MGP_DBA2J_T0066575	-	484	-	-	- (aa)	-	-
MGP_DBA2J_T0066574	-	591	-	-	- (aa)	-	-
MGP_DBA2J_T0066568	-	679	-	MGP_DBA2J_P0066568	63 (aa)	-	-
MGP_DBA2J_T0066569	-	5866	-	MGP_DBA2J_P0066569	1648 (aa)	-	-
MGP_DBA2J_T0066567	-	6055	XM_006502978	MGP_DBA2J_P0066567	1644 (aa)	XP_006503041	B2RX14

Gene Model

Click here to download MGP_DBA2J_G0028368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0028368's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0028368	Zcchc11	59	58.396	MGP_DBA2J_G0020477	Zcchc6	63	67.209