EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_DBA2J_G0028679 (Gene tree)
Gene ID
-
Gene Symbol
Trnau1ap
Alias
1110007F05Rik|AA387999|SECp43|Secp43|Trspap1|WI1-2643G14.2
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Mus_musculus_dba2j
Status
putative
Strand
Minus strand
Length
17919 bases
Position
chr4:129290851-129308769
Accession
1919037
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_DBA2J_P0067968RRM_1PF00076.229.8e-2712
MGP_DBA2J_P0067968RRM_1PF00076.229.8e-2722
MGP_DBA2J_P0067969RRM_1PF00076.223.3e-1711
MGP_DBA2J_P0067973RRM_1PF00076.221.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_DBA2J_T0067974-600-MGP_DBA2J_P006797447 (aa)--
MGP_DBA2J_T0067975-553--- (aa)--
MGP_DBA2J_T0067969-961-MGP_DBA2J_P0067969247 (aa)--
MGP_DBA2J_T0067968-1130XM_011250332MGP_DBA2J_P0067968287 (aa)XP_011248634Q80VC6
MGP_DBA2J_T0067970-1791--- (aa)--
MGP_DBA2J_T0067971-650--- (aa)--
MGP_DBA2J_T0067972-1017-MGP_DBA2J_P006797286 (aa)--
MGP_DBA2J_T0067973-474-MGP_DBA2J_P0067973146 (aa)--
MGP_DBA2J_T0067978-371-MGP_DBA2J_P006797870 (aa)--
MGP_DBA2J_T0067976-663-MGP_DBA2J_P006797649 (aa)--
MGP_DBA2J_T0067979-621--- (aa)--
MGP_DBA2J_T0067977-679--- (aa)--
Gene Model
Click here to download MGP_DBA2J_G0028679's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0028679's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_DBA2J_G0028679Trnau1ap8834.211MGP_DBA2J_G0027016Pabpc4l8931.875
MGP_DBA2J_G0028679Trnau1ap9830.952MGP_DBA2J_G0028258Elavl26630.952
MGP_DBA2J_G0028679Trnau1ap6032.386MGP_DBA2J_G0032905Tial17333.019
MGP_DBA2J_G0028679Trnau1ap7930.198MGP_DBA2J_G0030794Tia16031.285

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