EuRBPDB

Description

Ensembl ID: MGP_DBA2J_G0028776 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpr
Alias: 2610003J05Rik|2610528B01Rik|Hnrpr|Hnrpr {ECO:0000313|EMBL:AAH38051.1,GN ECO:0000313|MGI:MGI:1891692}|hnRNPR
Full Name: heterogeneous nuclear ribonucleoprotein R
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 49347 bases
Position: chr4:133359231-133408577
Accession: 1891692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0068405	RRM_1	PF00076.22	2.3e-43	1	3
MGP_DBA2J_P0068405	RRM_1	PF00076.22	2.3e-43	2	3
MGP_DBA2J_P0068405	RRM_1	PF00076.22	2.3e-43	3	3
MGP_DBA2J_P0068408	RRM_1	PF00076.22	2.3e-43	1	3
MGP_DBA2J_P0068408	RRM_1	PF00076.22	2.3e-43	2	3
MGP_DBA2J_P0068408	RRM_1	PF00076.22	2.3e-43	3	3
MGP_DBA2J_P0068406	RRM_1	PF00076.22	3.4e-43	1	3
MGP_DBA2J_P0068406	RRM_1	PF00076.22	3.4e-43	2	3
MGP_DBA2J_P0068406	RRM_1	PF00076.22	3.4e-43	3	3
MGP_DBA2J_P0068407	RRM_1	PF00076.22	3.4e-43	1	3
MGP_DBA2J_P0068407	RRM_1	PF00076.22	3.4e-43	2	3
MGP_DBA2J_P0068407	RRM_1	PF00076.22	3.4e-43	3	3
MGP_DBA2J_P0068411	RRM_1	PF00076.22	5.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0068412	-	292	-	MGP_DBA2J_P0068412	73 (aa)	-	-
MGP_DBA2J_T0068413	-	474	-	-	- (aa)	-	-
MGP_DBA2J_T0068410	-	576	-	MGP_DBA2J_P0068410	72 (aa)	-	-
MGP_DBA2J_T0068411	-	980	-	MGP_DBA2J_P0068411	270 (aa)	-	-
MGP_DBA2J_T0068405	-	2543	XM_006539221	MGP_DBA2J_P0068405	531 (aa)	XP_006539284	A2AW40
MGP_DBA2J_T0068414	-	3827	-	-	- (aa)	-	-
MGP_DBA2J_T0068407	-	2683	-	MGP_DBA2J_P0068407	632 (aa)	-	-
MGP_DBA2J_T0068406	-	21322	-	MGP_DBA2J_P0068406	632 (aa)	-	-
MGP_DBA2J_T0068409	-	859	-	MGP_DBA2J_P0068409	103 (aa)	-	-
MGP_DBA2J_T0068408	-	2647	-	MGP_DBA2J_P0068408	531 (aa)	-	-
MGP_DBA2J_T0068415	-	1912	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0028776	Hnrnpr	59	56.329	MGP_DBA2J_G0027157	Rbm46	65	56.774
MGP_DBA2J_G0028776	Hnrnpr	100	82.486	MGP_DBA2J_G0034921	Syncrip	99	79.841
MGP_DBA2J_G0028776	Hnrnpr	57	37.908	MGP_DBA2J_G0024123	Dnd1	62	33.040
MGP_DBA2J_G0028776	Hnrnpr	85	45.815	MGP_DBA2J_G0029402	Rbm47	88	59.859
MGP_DBA2J_G0028776	Hnrnpr	59	52.997	MGP_DBA2J_G0024879	A1cf	52	53.896