EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0028860 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: AA589413|Lp-1|Miz1|Zfp100|Znf151|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 22978 bases
Position: chr4:138615812-138638789
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0068749	zf-C2H2	PF00096.26	2.8e-60	1	10
MGP_DBA2J_P0068749	zf-C2H2	PF00096.26	2.8e-60	2	10
MGP_DBA2J_P0068749	zf-C2H2	PF00096.26	2.8e-60	3	10
MGP_DBA2J_P0068749	zf-C2H2	PF00096.26	2.8e-60	4	10
MGP_DBA2J_P0068749	zf-C2H2	PF00096.26	2.8e-60	5	10
MGP_DBA2J_P0068749	zf-C2H2	PF00096.26	2.8e-60	6	10
MGP_DBA2J_P0068749	zf-C2H2	PF00096.26	2.8e-60	7	10
MGP_DBA2J_P0068749	zf-C2H2	PF00096.26	2.8e-60	8	10
MGP_DBA2J_P0068749	zf-C2H2	PF00096.26	2.8e-60	9	10
MGP_DBA2J_P0068749	zf-C2H2	PF00096.26	2.8e-60	10	10
MGP_DBA2J_P0068749	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0068755	-	867	-	-	- (aa)	-	-
MGP_DBA2J_T0068754	-	771	-	-	- (aa)	-	-
MGP_DBA2J_T0068751	-	2973	-	-	- (aa)	-	-
MGP_DBA2J_T0068750	-	3478	-	-	- (aa)	-	-
MGP_DBA2J_T0068753	-	785	-	-	- (aa)	-	-
MGP_DBA2J_T0068752	-	337	-	-	- (aa)	-	-
MGP_DBA2J_T0068749	-	2722	XM_006538727	MGP_DBA2J_P0068749	794 (aa)	XP_006538790	Q60821

Gene Model

Click here to download MGP_DBA2J_G0028860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0028860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0028860	Zbtb17	69	38.288	MGP_DBA2J_G0020547	Zfp748	91	44.109
MGP_DBA2J_G0028860	Zbtb17	71	39.572	MGP_DBA2J_G0023084	Zfp945	93	39.583
MGP_DBA2J_G0028860	Zbtb17	78	38.433	MGP_DBA2J_G0031748	Zfp974	83	38.433
MGP_DBA2J_G0028860	Zbtb17	61	44.444	MGP_DBA2J_G0018421	Bcl6b	68	44.248
MGP_DBA2J_G0028860	Zbtb17	56	44.086	MGP_DBA2J_G0031647	Zfp94	76	44.086
MGP_DBA2J_G0028860	Zbtb17	59	46.746	MGP_DBA2J_G0031642	Zfp111	72	46.746
MGP_DBA2J_G0028860	Zbtb17	62	43.182	MGP_DBA2J_G0031640	Zfp235	71	44.248
MGP_DBA2J_G0028860	Zbtb17	58	44.980	MGP_DBA2J_G0031641	Zfp114	54	44.980
MGP_DBA2J_G0028860	Zbtb17	56	42.638	MGP_DBA2J_G0034293	Zfp872	83	41.964
MGP_DBA2J_G0028860	Zbtb17	63	38.614	MGP_DBA2J_G0030518	Repin1	93	38.614
MGP_DBA2J_G0028860	Zbtb17	78	39.568	MGP_DBA2J_G0026443	Gzf1	83	37.118
MGP_DBA2J_G0028860	Zbtb17	58	40.968	MGP_DBA2J_G0033586	Zfp882	85	42.985
MGP_DBA2J_G0028860	Zbtb17	56	35.083	MGP_DBA2J_G0026725	Zfp334	65	39.216
MGP_DBA2J_G0028860	Zbtb17	58	41.141	MGP_DBA2J_G0020530	Zfp759	86	41.141
MGP_DBA2J_G0028860	Zbtb17	61	42.727	MGP_DBA2J_G0024436	Zfp236	69	42.727
MGP_DBA2J_G0028860	Zbtb17	61	43.939	MGP_DBA2J_G0031639	Zfp112	61	43.939
MGP_DBA2J_G0028860	Zbtb17	62	50.909	MGP_DBA2J_G0029321	Zbtb49	62	67.742
MGP_DBA2J_G0028860	Zbtb17	62	34.819	MGP_DBA2J_G0033798	Zfp319	91	37.805
MGP_DBA2J_G0028860	Zbtb17	58	42.857	MGP_DBA2J_G0032855	Zfp768	52	42.231
MGP_DBA2J_G0028860	Zbtb17	56	40.741	MGP_DBA2J_G0031396	Zfp865	78	35.743
MGP_DBA2J_G0028860	Zbtb17	63	42.606	MGP_DBA2J_G0023064	Zfp51	82	42.183
MGP_DBA2J_G0028860	Zbtb17	56	41.606	MGP_DBA2J_G0020529	Rslcan18	66	41.600
MGP_DBA2J_G0028860	Zbtb17	64	42.899	MGP_DBA2J_G0023062	Zfp677	83	42.899
MGP_DBA2J_G0028860	Zbtb17	56	43.544	MGP_DBA2J_G0031644	Zfp108	58	43.544
MGP_DBA2J_G0028860	Zbtb17	58	42.857	MGP_DBA2J_G0031941	Zfp715	89	43.636
MGP_DBA2J_G0028860	Zbtb17	55	41.083	MGP_DBA2J_G0018235	Zfp867	81	41.083
MGP_DBA2J_G0028860	Zbtb17	55	43.322	MGP_DBA2J_G0018088	Zfp454	66	42.424
MGP_DBA2J_G0028860	Zbtb17	79	32.955	MGP_DBA2J_G0020802	Zfp131	72	32.955
MGP_DBA2J_G0028860	Zbtb17	72	34.627	MGP_DBA2J_G0023091	Zscan10	78	43.165
MGP_DBA2J_G0028860	Zbtb17	69	44.706	MGP_DBA2J_G0031811	Zfp420	97	44.706
MGP_DBA2J_G0028860	Zbtb17	79	46.354	MGP_DBA2J_G0026948	Mynn	85	46.354
MGP_DBA2J_G0028860	Zbtb17	59	36.986	MGP_DBA2J_G0018185	Zfp672	90	40.000
MGP_DBA2J_G0028860	Zbtb17	54	46.512	MGP_DBA2J_G0033957	Zfp1	67	42.083
MGP_DBA2J_G0028860	Zbtb17	59	32.021	MGP_DBA2J_G0031677	Zfp574	71	38.532