EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0069013	RRM_1	PF00076.22	1.2e-26	1	2
MGP_DBA2J_P0069013	RRM_1	PF00076.22	1.2e-26	2	2
MGP_DBA2J_P0069006	RRM_1	PF00076.22	4.4e-26	1	2
MGP_DBA2J_P0069006	RRM_1	PF00076.22	4.4e-26	2	2
MGP_DBA2J_P0068990	RRM_1	PF00076.22	4.5e-26	1	2
MGP_DBA2J_P0068990	RRM_1	PF00076.22	4.5e-26	2	2
MGP_DBA2J_P0069010	RRM_1	PF00076.22	4.5e-26	1	2
MGP_DBA2J_P0069010	RRM_1	PF00076.22	4.5e-26	2	2
MGP_DBA2J_P0068989	RRM_1	PF00076.22	4.8e-26	1	2
MGP_DBA2J_P0068989	RRM_1	PF00076.22	4.8e-26	2	2
MGP_DBA2J_P0069011	RRM_1	PF00076.22	4.8e-26	1	2
MGP_DBA2J_P0069011	RRM_1	PF00076.22	4.8e-26	2	2
MGP_DBA2J_P0068991	RRM_1	PF00076.22	4.9e-26	1	2
MGP_DBA2J_P0068991	RRM_1	PF00076.22	4.9e-26	2	2
MGP_DBA2J_P0069012	RRM_1	PF00076.22	4.9e-26	1	2
MGP_DBA2J_P0069012	RRM_1	PF00076.22	4.9e-26	2	2
MGP_DBA2J_P0069015	RRM_1	PF00076.22	4e-15	1	1
MGP_DBA2J_P0069016	RRM_1	PF00076.22	4.9e-11	1	1
MGP_DBA2J_P0069007	RRM_1	PF00076.22	6.6e-09	1	1
MGP_DBA2J_P0069009	RRM_1	PF00076.22	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0069015	-	818	-	MGP_DBA2J_P0069015	243 (aa)	-	-
MGP_DBA2J_T0069014	-	1411	-	MGP_DBA2J_P0069014	84 (aa)	-	-
MGP_DBA2J_T0069017	-	370	-	-	- (aa)	-	-
MGP_DBA2J_T0069016	-	740	-	MGP_DBA2J_P0069016	149 (aa)	-	-
MGP_DBA2J_T0069011	-	1011	-	MGP_DBA2J_P0069011	304 (aa)	-	-
MGP_DBA2J_T0069010	-	1096	-	MGP_DBA2J_P0069010	298 (aa)	-	-
MGP_DBA2J_T0069013	-	709	-	MGP_DBA2J_P0069013	199 (aa)	-	-
MGP_DBA2J_T0069012	-	923	-	MGP_DBA2J_P0069012	302 (aa)	-	-
MGP_DBA2J_T0068993	-	731	-	-	- (aa)	-	-
MGP_DBA2J_T0068992	-	1773	-	MGP_DBA2J_P0068992	298 (aa)	-	-
MGP_DBA2J_T0068991	-	6158	-	MGP_DBA2J_P0068991	302 (aa)	-	-
MGP_DBA2J_T0068990	-	6228	-	MGP_DBA2J_P0068990	298 (aa)	-	-
MGP_DBA2J_T0068997	-	617	-	-	- (aa)	-	-
MGP_DBA2J_T0068996	-	908	-	-	- (aa)	-	-
MGP_DBA2J_T0068995	-	676	-	MGP_DBA2J_P0068995	88 (aa)	-	-
MGP_DBA2J_T0068994	-	529	-	MGP_DBA2J_P0068994	98 (aa)	-	-
MGP_DBA2J_T0068999	-	2006	-	MGP_DBA2J_P0068999	298 (aa)	-	-
MGP_DBA2J_T0068998	-	358	-	-	- (aa)	-	-
MGP_DBA2J_T0068989	-	6246	XM_011250237	MGP_DBA2J_P0068989	304 (aa)	XP_011248539	Q921F2
MGP_DBA2J_T0069008	-	2159	-	MGP_DBA2J_P0069008	414 (aa)	-	-
MGP_DBA2J_T0069009	-	748	-	MGP_DBA2J_P0069009	84 (aa)	-	-
MGP_DBA2J_T0069006	-	1635	-	MGP_DBA2J_P0069006	295 (aa)	-	-
MGP_DBA2J_T0069007	-	495	-	MGP_DBA2J_P0069007	128 (aa)	-	-
MGP_DBA2J_T0069004	-	684	-	MGP_DBA2J_P0069004	137 (aa)	-	-
MGP_DBA2J_T0069005	-	517	-	MGP_DBA2J_P0069005	77 (aa)	-	-
MGP_DBA2J_T0069002	-	781	-	MGP_DBA2J_P0069002	140 (aa)	-	-
MGP_DBA2J_T0069003	-	1304	-	MGP_DBA2J_P0069003	285 (aa)	-	-
MGP_DBA2J_T0069000	-	1011	-	MGP_DBA2J_P0069000	34 (aa)	-	-
MGP_DBA2J_T0069001	-	741	-	MGP_DBA2J_P0069001	175 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0028942	Tardbp	92	35.000	MGP_DBA2J_G0035549	Rbmx	78	35.000
MGP_DBA2J_G0028942	Tardbp	79	34.021	MGP_DBA2J_G0029782	Msi1	62	34.021
MGP_DBA2J_G0028942	Tardbp	77	31.447	MGP_DBA2J_G0029595	Hnrnpdl	64	30.000
MGP_DBA2J_G0028942	Tardbp	77	38.194	MGP_DBA2J_G0029593	Hnrnpd	100	64.000
MGP_DBA2J_G0028942	Tardbp	94	30.282	MGP_DBA2J_G0030552	Hnrnpa2b1	66	30.348
MGP_DBA2J_G0028942	Tardbp	88	31.818	MGP_DBA2J_G0017333	Dazap1	89	35.065
MGP_DBA2J_G0028942	Tardbp	79	31.818	MGP_DBA2J_G0018758	Msi2	100	35.398
MGP_DBA2J_G0028942	Tardbp	86	33.146	MGP_DBA2J_G0018102	Hnrnpab	82	32.099
MGP_DBA2J_G0028942	Tardbp	72	38.806	MGP_DBA2J_G0033155	Elavl1	59	31.481
MGP_DBA2J_G0028942	Tardbp	66	32.593	MGP_DBA2J_G0022268	Hnrnpa1	52	30.151