EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_DBA2J_G0029402 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_dba2j
Status
putative
Strand
Minus strand
Length
155545 bases
Position
chr5:63289668-63445212
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_DBA2J_P0071639RRM_1PF00076.223.6e-3713
MGP_DBA2J_P0071639RRM_1PF00076.223.6e-3723
MGP_DBA2J_P0071639RRM_1PF00076.223.6e-3733
MGP_DBA2J_P0071635RRM_1PF00076.225.7e-3713
MGP_DBA2J_P0071635RRM_1PF00076.225.7e-3723
MGP_DBA2J_P0071635RRM_1PF00076.225.7e-3733
MGP_DBA2J_P0071636RRM_1PF00076.225.7e-3713
MGP_DBA2J_P0071636RRM_1PF00076.225.7e-3723
MGP_DBA2J_P0071636RRM_1PF00076.225.7e-3733
MGP_DBA2J_P0071637RRM_1PF00076.225.7e-3713
MGP_DBA2J_P0071637RRM_1PF00076.225.7e-3723
MGP_DBA2J_P0071637RRM_1PF00076.225.7e-3733
MGP_DBA2J_P0071638RRM_1PF00076.225.7e-3713
MGP_DBA2J_P0071638RRM_1PF00076.225.7e-3723
MGP_DBA2J_P0071638RRM_1PF00076.225.7e-3733
MGP_DBA2J_P0071640RRM_1PF00076.225.7e-3713
MGP_DBA2J_P0071640RRM_1PF00076.225.7e-3723
MGP_DBA2J_P0071640RRM_1PF00076.225.7e-3733
MGP_DBA2J_P0071641RRM_1PF00076.225.7e-3713
MGP_DBA2J_P0071641RRM_1PF00076.225.7e-3723
MGP_DBA2J_P0071641RRM_1PF00076.225.7e-3733
MGP_DBA2J_P0071643RRM_1PF00076.222.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_DBA2J_T0071635-4559XM_006503956MGP_DBA2J_P0071635590 (aa)XP_006504019Q91WT8
MGP_DBA2J_T0071636-5067-MGP_DBA2J_P0071636590 (aa)--
MGP_DBA2J_T0071637-4499-MGP_DBA2J_P0071637590 (aa)--
MGP_DBA2J_T0071638-4751-MGP_DBA2J_P0071638590 (aa)--
MGP_DBA2J_T0071639-2828-MGP_DBA2J_P0071639521 (aa)--
MGP_DBA2J_T0071641-2051-MGP_DBA2J_P0071641590 (aa)--
MGP_DBA2J_T0071640-3035-MGP_DBA2J_P0071640590 (aa)--
MGP_DBA2J_T0071643-703-MGP_DBA2J_P0071643158 (aa)--
MGP_DBA2J_T0071642-2351--- (aa)--
MGP_DBA2J_T0071645-332-MGP_DBA2J_P007164513 (aa)--
MGP_DBA2J_T0071644-504--- (aa)--
MGP_DBA2J_T0071647-452--- (aa)--
MGP_DBA2J_T0071646-530-MGP_DBA2J_P00716466 (aa)--
MGP_DBA2J_T0071648-464--- (aa)--
Gene Model
Click here to download MGP_DBA2J_G0029402's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0029402's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_DBA2J_G0029402Rbm479473.649MGP_DBA2J_G0027157Rbm466672.468
MGP_DBA2J_G0029402Rbm478858.451MGP_DBA2J_G0034921Syncrip7557.522
MGP_DBA2J_G0029402Rbm478967.376MGP_DBA2J_G0024879A1cf7557.816
MGP_DBA2J_G0029402Rbm478859.859MGP_DBA2J_G0028776Hnrnpr8545.815
MGP_DBA2J_G0029402Rbm478150.781MGP_DBA2J_G0024123Dnd15841.748

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