EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0029524 (Gene tree)
Gene ID: -
Gene Symbol: Grsf1
Alias: BB232551|C80280|D5Wsu31e
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 16984 bases
Position: chr5:86190177-86207160
Accession: 106479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0072232	RRM_1	PF00076.22	2.4e-23	1	1
MGP_DBA2J_P0072231	RRM_1	PF00076.22	8.5e-23	1	1
MGP_DBA2J_P0072234	RRM_1	PF00076.22	9.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0072235	-	485	-	MGP_DBA2J_P0072235	57 (aa)	-	-
MGP_DBA2J_T0072234	-	776	-	MGP_DBA2J_P0072234	137 (aa)	-	-
MGP_DBA2J_T0072237	-	321	-	-	- (aa)	-	-
MGP_DBA2J_T0072236	-	425	-	MGP_DBA2J_P0072236	11 (aa)	-	-
MGP_DBA2J_T0072231	-	2538	-	MGP_DBA2J_P0072231	479 (aa)	-	Q8C5Q4
MGP_DBA2J_T0072233	-	899	-	-	- (aa)	-	-
MGP_DBA2J_T0072232	-	2286	-	MGP_DBA2J_P0072232	362 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0029524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0029524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0029524	Grsf1	70	67.532	MGP_DBA2J_G0017148	Hnrnph3	58	67.089
MGP_DBA2J_G0029524	Grsf1	92	65.333	MGP_DBA2J_G0018082	Hnrnph1	60	64.474
MGP_DBA2J_G0029524	Grsf1	99	50.394	MGP_DBA2J_G0035881	-	80	48.588
MGP_DBA2J_G0029524	Grsf1	60	52.727	MGP_DBA2J_G0035508	-	95	44.444