EuRBPDB

Description

Ensembl ID: MGP_DBA2J_G0029595 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 6111 bases
Position: chr5:97904596-97910706
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0072533	RRM_1	PF00076.22	2.3e-33	1	2
MGP_DBA2J_P0072533	RRM_1	PF00076.22	2.3e-33	2	2
MGP_DBA2J_P0072532	RRM_1	PF00076.22	5.3e-33	1	2
MGP_DBA2J_P0072532	RRM_1	PF00076.22	5.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0072536	-	1506	-	MGP_DBA2J_P0072536	110 (aa)	-	-
MGP_DBA2J_T0072537	-	846	-	-	- (aa)	-	-
MGP_DBA2J_T0072534	-	2149	-	MGP_DBA2J_P0072534	420 (aa)	-	-
MGP_DBA2J_T0072535	-	884	-	-	- (aa)	-	-
MGP_DBA2J_T0072532	-	2752	-	MGP_DBA2J_P0072532	420 (aa)	-	-
MGP_DBA2J_T0072533	-	2374	-	MGP_DBA2J_P0072533	322 (aa)	-	-
MGP_DBA2J_T0072531	-	1842	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0029595	Hnrnpdl	69	36.036	MGP_DBA2J_G0017333	Dazap1	99	39.881
MGP_DBA2J_G0029595	Hnrnpdl	89	57.292	MGP_DBA2J_G0018102	Hnrnpab	82	58.419
MGP_DBA2J_G0029595	Hnrnpdl	89	65.278	MGP_DBA2J_G0029593	Hnrnpd	100	80.000
MGP_DBA2J_G0029595	Hnrnpdl	64	30.000	MGP_DBA2J_G0028942	Tardbp	77	31.447
MGP_DBA2J_G0029595	Hnrnpdl	54	36.709	MGP_DBA2J_G0017327	Cirbp	73	36.709
MGP_DBA2J_G0029595	Hnrnpdl	78	41.634	MGP_DBA2J_G0018758	Msi2	100	54.867
MGP_DBA2J_G0029595	Hnrnpdl	75	39.676	MGP_DBA2J_G0029782	Msi1	58	48.052
MGP_DBA2J_G0029595	Hnrnpdl	58	38.542	MGP_DBA2J_G0030552	Hnrnpa2b1	58	38.824
MGP_DBA2J_G0029595	Hnrnpdl	51	34.706	MGP_DBA2J_G0020459	Hnrnpa0	56	34.706