EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0029778 (Gene tree)
Gene ID: -
Gene Symbol: Srsf9
Alias: 25kDa|2610029M16Rik|SRp30c|Sfrs9
Full Name: serine/arginine-rich splicing factor 9
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 5886 bases
Position: chr5:113566048-113571933
Accession: 104896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0073417	RRM_1	PF00076.22	3.6e-33	1	2
MGP_DBA2J_P0073417	RRM_1	PF00076.22	3.6e-33	2	2
MGP_DBA2J_P0073420	RRM_1	PF00076.22	9.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0073417	-	1162	XM_011248158	MGP_DBA2J_P0073417	222 (aa)	XP_011246460	Q9D0B0
MGP_DBA2J_T0073420	-	767	-	MGP_DBA2J_P0073420	158 (aa)	-	-
MGP_DBA2J_T0073418	-	901	-	-	- (aa)	-	-
MGP_DBA2J_T0073419	-	474	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0029778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0029778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0029778	Srsf9	78	70.330	MGP_DBA2J_G0018753	Srsf1	79	79.762
MGP_DBA2J_G0029778	Srsf9	68	39.394	MGP_DBA2J_G0019724	Srsf5	89	48.780
MGP_DBA2J_G0029778	Srsf9	70	38.674	MGP_DBA2J_G0026645	Srsf6	51	47.297