EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0029913 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 15049 bases
Position: chr5:123048940-123063988
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0074204	ResIII	PF04851.15	7.7e-07	1	1
MGP_DBA2J_P0074201	ResIII	PF04851.15	7.9e-07	1	1
MGP_DBA2J_P0074204	DEAD	PF00270.29	1e-41	1	1
MGP_DBA2J_P0074201	DEAD	PF00270.29	1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0074202	-	3516	-	MGP_DBA2J_P0074202	135 (aa)	-	-
MGP_DBA2J_T0074203	-	445	-	-	- (aa)	-	-
MGP_DBA2J_T0074201	-	2799	-	MGP_DBA2J_P0074201	600 (aa)	-	Q6ZPL9
MGP_DBA2J_T0074206	-	1430	-	-	- (aa)	-	-
MGP_DBA2J_T0074207	-	824	-	-	- (aa)	-	-
MGP_DBA2J_T0074204	-	2737	-	MGP_DBA2J_P0074204	596 (aa)	-	-
MGP_DBA2J_T0074205	-	477	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0029913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0029913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0029913	Ddx55	75	38.411	MGP_DBA2J_G0034620	Ddx10	50	38.411
MGP_DBA2J_G0029913	Ddx55	63	30.750	MGP_DBA2J_G0018696	Ddx52	62	30.750
MGP_DBA2J_G0029913	Ddx55	59	35.440	MGP_DBA2J_G0020434	Ddx41	55	35.440
MGP_DBA2J_G0029913	Ddx55	66	40.449	MGP_DBA2J_G0019876	Ddx24	50	40.449
MGP_DBA2J_G0029913	Ddx55	60	32.044	MGP_DBA2J_G0034880	Ddx43	53	31.768
MGP_DBA2J_G0029913	Ddx55	64	33.747	MGP_DBA2J_G0035380	Ddx3x	56	33.663
MGP_DBA2J_G0029913	Ddx55	60	30.137	MGP_DBA2J_G0019145	Ddx5	56	30.137
MGP_DBA2J_G0029913	Ddx55	60	32.687	MGP_DBA2J_G0021909	Ddx17	53	32.687
MGP_DBA2J_G0029913	Ddx55	59	31.429	MGP_DBA2J_G0016389	Ddx59	54	31.429
MGP_DBA2J_G0029913	Ddx55	60	30.886	MGP_DBA2J_G0033888	Ddx28	69	30.886
MGP_DBA2J_G0029913	Ddx55	79	36.042	MGP_DBA2J_G0016260	Ddx18	68	36.192
MGP_DBA2J_G0029913	Ddx55	64	33.995	MGP_DBA2J_G0016762	D1Pas1	56	33.995
MGP_DBA2J_G0029913	Ddx55	59	30.833	MGP_DBA2J_G0018381	Eif4a1	95	30.244
MGP_DBA2J_G0029913	Ddx55	59	30.362	MGP_DBA2J_G0022512	Eif4a2	93	30.362
MGP_DBA2J_G0029913	Ddx55	59	35.977	MGP_DBA2J_G0031233	Ddx47	81	35.977
MGP_DBA2J_G0029913	Ddx55	58	33.056	MGP_DBA2J_G0033520	Ddx49	92	33.238
MGP_DBA2J_G0029913	Ddx55	75	31.528	MGP_DBA2J_G0025378	Ddx31	74	31.783