EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0030552 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 8963 bases
Position: chr6:48208176-48217138
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0077277	RRM_1	PF00076.22	3.3e-32	1	2
MGP_DBA2J_P0077277	RRM_1	PF00076.22	3.3e-32	2	2
MGP_DBA2J_P0077283	RRM_1	PF00076.22	3.3e-32	1	2
MGP_DBA2J_P0077283	RRM_1	PF00076.22	3.3e-32	2	2
MGP_DBA2J_P0077280	RRM_1	PF00076.22	5e-32	1	2
MGP_DBA2J_P0077280	RRM_1	PF00076.22	5e-32	2	2
MGP_DBA2J_P0077284	RRM_1	PF00076.22	5e-32	1	2
MGP_DBA2J_P0077284	RRM_1	PF00076.22	5e-32	2	2
MGP_DBA2J_P0077282	RRM_1	PF00076.22	5.5e-32	1	2
MGP_DBA2J_P0077282	RRM_1	PF00076.22	5.5e-32	2	2
MGP_DBA2J_P0077286	RRM_1	PF00076.22	1.9e-15	1	1
MGP_DBA2J_P0077286	HnRNPA1	PF11627.8	1.9e-16	1	1
MGP_DBA2J_P0077277	HnRNPA1	PF11627.8	2.1e-06	1	1
MGP_DBA2J_P0077283	HnRNPA1	PF11627.8	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0077284	-	1638	-	MGP_DBA2J_P0077284	341 (aa)	-	-
MGP_DBA2J_T0077285	-	766	-	-	- (aa)	-	-
MGP_DBA2J_T0077287	-	706	-	-	- (aa)	-	-
MGP_DBA2J_T0077286	-	466	-	MGP_DBA2J_P0077286	154 (aa)	-	-
MGP_DBA2J_T0077278	-	1703	-	MGP_DBA2J_P0077278	353 (aa)	-	-
MGP_DBA2J_T0077279	-	1542	-	MGP_DBA2J_P0077279	301 (aa)	-	-
MGP_DBA2J_T0077283	-	1518	-	MGP_DBA2J_P0077283	301 (aa)	-	-
MGP_DBA2J_T0077282	-	1728	-	MGP_DBA2J_P0077282	353 (aa)	-	-
MGP_DBA2J_T0077281	-	1554	-	-	- (aa)	-	-
MGP_DBA2J_T0077280	-	1662	-	MGP_DBA2J_P0077280	341 (aa)	-	-
MGP_DBA2J_T0077277	-	1647	XM_006506373	MGP_DBA2J_P0077277	301 (aa)	XP_006506436	O88569
MGP_DBA2J_T0077289	-	3645	-	-	- (aa)	-	-
MGP_DBA2J_T0077288	-	596	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0030552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0030552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0030552	Hnrnpa2b1	72	41.148	MGP_DBA2J_G0029593	Hnrnpd	97	44.545
MGP_DBA2J_G0030552	Hnrnpa2b1	58	38.824	MGP_DBA2J_G0029595	Hnrnpdl	58	38.542
MGP_DBA2J_G0030552	Hnrnpa2b1	69	31.776	MGP_DBA2J_G0015878	Boll	64	33.333
MGP_DBA2J_G0030552	Hnrnpa2b1	50	44.737	MGP_DBA2J_G0017327	Cirbp	70	44.737
MGP_DBA2J_G0030552	Hnrnpa2b1	82	74.286	MGP_DBA2J_G0022268	Hnrnpa1	87	52.584
MGP_DBA2J_G0030552	Hnrnpa2b1	91	41.379	MGP_DBA2J_G0029782	Msi1	61	43.750
MGP_DBA2J_G0030552	Hnrnpa2b1	66	32.143	MGP_DBA2J_G0034715	Celf6	79	31.250
MGP_DBA2J_G0030552	Hnrnpa2b1	60	41.026	MGP_DBA2J_G0017333	Dazap1	99	40.237
MGP_DBA2J_G0030552	Hnrnpa2b1	61	38.068	MGP_DBA2J_G0018102	Hnrnpab	64	37.368
MGP_DBA2J_G0030552	Hnrnpa2b1	56	38.554	MGP_DBA2J_G0035549	Rbmx	90	40.299
MGP_DBA2J_G0030552	Hnrnpa2b1	59	55.307	MGP_DBA2J_G0020459	Hnrnpa0	91	49.462
MGP_DBA2J_G0030552	Hnrnpa2b1	66	30.348	MGP_DBA2J_G0028942	Tardbp	94	30.282
MGP_DBA2J_G0030552	Hnrnpa2b1	56	48.193	MGP_DBA2J_G0018758	Msi2	100	44.348