EuRBPDB

Description

Ensembl ID: MGP_DBA2J_G0030646 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 75972 bases
Position: chr6:61815905-61891876
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0077609	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0077614	-	739	-	MGP_DBA2J_P0077614	73 (aa)	-	-
MGP_DBA2J_T0077615	-	2821	-	-	- (aa)	-	-
MGP_DBA2J_T0077609	-	5166	-	MGP_DBA2J_P0077609	1021 (aa)	-	-
MGP_DBA2J_T0077608	-	602	XM_006505509	MGP_DBA2J_P0077608	134 (aa)	XP_006505572	Q04692
MGP_DBA2J_T0077610	-	466	-	-	- (aa)	-	-
MGP_DBA2J_T0077611	-	600	-	MGP_DBA2J_P0077611	73 (aa)	-	-
MGP_DBA2J_T0077612	-	734	-	MGP_DBA2J_P0077612	73 (aa)	-	-
MGP_DBA2J_T0077613	-	472	-	MGP_DBA2J_P0077613	68 (aa)	-	-
MGP_DBA2J_T0077618	-	635	-	-	- (aa)	-	-
MGP_DBA2J_T0077616	-	4177	-	MGP_DBA2J_P0077616	123 (aa)	-	-
MGP_DBA2J_T0077619	-	726	-	MGP_DBA2J_P0077619	45 (aa)	-	-
MGP_DBA2J_T0077622	-	2418	-	-	- (aa)	-	-
MGP_DBA2J_T0077617	-	643	-	-	- (aa)	-	-
MGP_DBA2J_T0077620	-	3062	-	-	- (aa)	-	-
MGP_DBA2J_T0077621	-	643	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0030646	Smarcad1	50	35.135	MGP_DBA2J_G0027463	Chd1l	51	35.135
MGP_DBA2J_G0030646	Smarcad1	51	37.705	MGP_DBA2J_G0024938	Hells	66	37.887
MGP_DBA2J_G0030646	Smarcad1	50	30.112	MGP_DBA2J_G0028429	Rad54l	66	30.112