EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_DBA2J_G0031046 (Gene tree)
Gene ID
-
Gene Symbol
Apobec1
Alias
Cdar1
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 1
Gene Type
protein_coding
Species
Mus_musculus_dba2j
Status
putative
Strand
Minus strand
Length
28444 bases
Position
chr6:119833099-119861542
Accession
103298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_DBA2J_P0079654APOBEC_NPF08210.118.3e-3011
MGP_DBA2J_P0079655APOBEC_NPF08210.118.3e-3011
MGP_DBA2J_P0079656APOBEC_NPF08210.118.3e-3011
MGP_DBA2J_P0079657APOBEC_NPF08210.114.2e-1711
MGP_DBA2J_P0079658APOBEC_NPF08210.113.1e-1311
MGP_DBA2J_P0079654APOBEC_CPF05240.141.8e-2211
MGP_DBA2J_P0079655APOBEC_CPF05240.141.8e-2211
MGP_DBA2J_P0079656APOBEC_CPF05240.141.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_DBA2J_T0079662-520--- (aa)--
MGP_DBA2J_T0079661-560--- (aa)--
MGP_DBA2J_T0079660-360-MGP_DBA2J_P007966025 (aa)--
MGP_DBA2J_T0079658-775-MGP_DBA2J_P0079658113 (aa)--
MGP_DBA2J_T0079659-372-MGP_DBA2J_P007965943 (aa)--
MGP_DBA2J_T0079656-2151-MGP_DBA2J_P0079656229 (aa)--
MGP_DBA2J_T0079657-666-MGP_DBA2J_P0079657121 (aa)--
MGP_DBA2J_T0079654-2289XM_006505401MGP_DBA2J_P0079654229 (aa)XP_006505464P51908
MGP_DBA2J_T0079655-2096-MGP_DBA2J_P0079655229 (aa)--
Gene Model
Click here to download MGP_DBA2J_G0031046's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0031046's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_DBA2J_G0031046Apobec17434.737MGP_DBA2J_G0021921Apobec38438.028
MGP_DBA2J_G0031046Apobec15639.706MGP_DBA2J_G0031045Aicda5341.509

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