EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_DBA2J_G0031233 (Gene tree)
Gene ID
-
Gene Symbol
Ddx47
Alias
4930588A18Rik|C77285
Full Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
Gene Type
protein_coding
Species
Mus_musculus_dba2j
Status
putative
Strand
Plus strand
Length
11906 bases
Position
chr6:132695666-132707571
Accession
1915005
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_DBA2J_P0080350ResIIIPF04851.151.1e-0511
MGP_DBA2J_P0080342ResIIIPF04851.151.5e-0511
MGP_DBA2J_P0080350DEADPF00270.291.7e-4811
MGP_DBA2J_P0080342DEADPF00270.292.8e-4811
MGP_DBA2J_P0080349DEADPF00270.294.3e-3812
MGP_DBA2J_P0080349DEADPF00270.294.3e-3822
MGP_DBA2J_P0080344DEADPF00270.291.1e-2111
MGP_DBA2J_P0080347DEADPF00270.293e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_DBA2J_T0080348-620--- (aa)--
MGP_DBA2J_T0080349-1139-MGP_DBA2J_P0080349379 (aa)--
MGP_DBA2J_T0080344-607-MGP_DBA2J_P0080344196 (aa)--
MGP_DBA2J_T0080345-978--- (aa)--
MGP_DBA2J_T0080346-4017--- (aa)--
MGP_DBA2J_T0080347-551-MGP_DBA2J_P0080347180 (aa)--
MGP_DBA2J_T0080342-1764-MGP_DBA2J_P0080342455 (aa)-Q9CWX9
MGP_DBA2J_T0080343-435-MGP_DBA2J_P0080343138 (aa)--
MGP_DBA2J_T0080353-3272-MGP_DBA2J_P008035361 (aa)--
MGP_DBA2J_T0080352-791--- (aa)--
MGP_DBA2J_T0080351-693--- (aa)--
MGP_DBA2J_T0080350-1078-MGP_DBA2J_P0080350359 (aa)--
Gene Model
Click here to download MGP_DBA2J_G0031233's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0031233's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_DBA2J_G0031233Ddx478531.458MGP_DBA2J_G0018381Eif4a19631.458
MGP_DBA2J_G0031233Ddx478137.168MGP_DBA2J_G0019145Ddx57137.457
MGP_DBA2J_G0031233Ddx479430.175MGP_DBA2J_G0017141Ddx505431.204
MGP_DBA2J_G0031233Ddx479638.261MGP_DBA2J_G0019876Ddx245038.028
MGP_DBA2J_G0031233Ddx479430.469MGP_DBA2J_G0022512Eif4a29432.637
MGP_DBA2J_G0031233Ddx478435.652MGP_DBA2J_G0025378Ddx316131.765
MGP_DBA2J_G0031233Ddx478633.690MGP_DBA2J_G0016762D1Pas15734.759
MGP_DBA2J_G0031233Ddx478837.705MGP_DBA2J_G0016260Ddx185538.525
MGP_DBA2J_G0031233Ddx478332.011MGP_DBA2J_G0018696Ddx525833.428
MGP_DBA2J_G0031233Ddx477049.398MGP_DBA2J_G0033888Ddx287233.079
MGP_DBA2J_G0031233Ddx478536.869MGP_DBA2J_G0021909Ddx175737.374
MGP_DBA2J_G0031233Ddx478533.333MGP_DBA2J_G0020434Ddx415835.556
MGP_DBA2J_G0031233Ddx479333.760MGP_DBA2J_G0020762Ddx45634.271
MGP_DBA2J_G0031233Ddx479131.806MGP_DBA2J_G0016389Ddx596033.602
MGP_DBA2J_G0031233Ddx479032.095MGP_DBA2J_G0033656Ddx398932.620
MGP_DBA2J_G0031233Ddx479134.218MGP_DBA2J_G0034880Ddx435935.678
MGP_DBA2J_G0031233Ddx479545.824MGP_DBA2J_G0033520Ddx499749.271
MGP_DBA2J_G0031233Ddx478135.977MGP_DBA2J_G0029913Ddx555935.977
MGP_DBA2J_G0031233Ddx478638.889MGP_DBA2J_G0017857Ddx569935.887
MGP_DBA2J_G0031233Ddx479630.749MGP_DBA2J_G0019310Eif4a39432.041
MGP_DBA2J_G0031233Ddx478633.690MGP_DBA2J_G0035380Ddx3x5634.492
MGP_DBA2J_G0031233Ddx478646.875MGP_DBA2J_G0019437Ddx16046.875
MGP_DBA2J_G0031233Ddx479031.662MGP_DBA2J_G0023466Ddx39b9935.811

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