EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0031652 (Gene tree)
Gene ID: -
Gene Symbol: Irgc1
Alias: F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc|LOC210145|LOC381989
Full Name: immunity-related GTPase family%2C cinema 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 20231 bases
Position: chr7:22147911-22168141
Accession: 2685948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0081898	MMR_HSR1	PF01926.23	6.4e-06	1	1
MGP_DBA2J_P0081899	MMR_HSR1	PF01926.23	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0081899	-	1737	-	MGP_DBA2J_P0081899	463 (aa)	-	-
MGP_DBA2J_T0081898	-	1835	XM_006539708	MGP_DBA2J_P0081898	463 (aa)	XP_006539771	A0A0U1RQ16
MGP_DBA2J_T0081901	-	661	-	-	- (aa)	-	-
MGP_DBA2J_T0081900	-	383	-	MGP_DBA2J_P0081900	82 (aa)	-	-
MGP_DBA2J_T0081902	-	342	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0031652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0031652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0031652	Irgc1	71	37.273	MGP_DBA2J_G0018047	Gm5431	79	43.590
MGP_DBA2J_G0031652	Irgc1	71	30.183	MGP_DBA2J_G0018043	Irgm1	76	35.169
MGP_DBA2J_G0031652	Irgc1	82	34.987	MGP_DBA2J_G0018049	Tgtp1	89	34.987
MGP_DBA2J_G0031652	Irgc1	82	33.158	MGP_DBA2J_G0024294	Iigp1	90	33.158
MGP_DBA2J_G0031652	Irgc1	74	37.318	MGP_DBA2J_G0024292	Gm4841	97	37.609
MGP_DBA2J_G0031652	Irgc1	83	34.115	MGP_DBA2J_G0024293	F830016B08Rik	89	34.115
MGP_DBA2J_G0031652	Irgc1	68	36.909	MGP_DBA2J_G0024291	Gm4951	77	36.909
MGP_DBA2J_G0031652	Irgc1	68	41.401	MGP_DBA2J_G0018050	Ifi47	75	41.401
MGP_DBA2J_G0031652	Irgc1	62	32.526	MGP_DBA2J_G0018182	Irgm2	69	32.526