EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0031724 (Gene tree)
Gene ID: -
Gene Symbol: Snrpa
Alias: C430021M15Rik|Rnu1a-1|Rnu1a1|U1 snRNP|U1-A|U1A
Full Name: small nuclear ribonucleoprotein polypeptide A
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 9507 bases
Position: chr7:25001416-25010922
Accession: 1855690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0082181	RRM_5	PF13893.6	4.7e-07	1	2
MGP_DBA2J_P0082181	RRM_5	PF13893.6	4.7e-07	2	2
MGP_DBA2J_P0082182	RRM_5	PF13893.6	4.7e-07	1	2
MGP_DBA2J_P0082182	RRM_5	PF13893.6	4.7e-07	2	2
MGP_DBA2J_P0082183	RRM_5	PF13893.6	4.7e-07	1	2
MGP_DBA2J_P0082183	RRM_5	PF13893.6	4.7e-07	2	2
MGP_DBA2J_P0082181	RRM_1	PF00076.22	4.5e-28	1	2
MGP_DBA2J_P0082181	RRM_1	PF00076.22	4.5e-28	2	2
MGP_DBA2J_P0082182	RRM_1	PF00076.22	4.5e-28	1	2
MGP_DBA2J_P0082182	RRM_1	PF00076.22	4.5e-28	2	2
MGP_DBA2J_P0082183	RRM_1	PF00076.22	4.5e-28	1	2
MGP_DBA2J_P0082183	RRM_1	PF00076.22	4.5e-28	2	2
MGP_DBA2J_P0082184	RRM_1	PF00076.22	1.1e-18	1	2
MGP_DBA2J_P0082184	RRM_1	PF00076.22	1.1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0082180	-	509	-	-	- (aa)	-	-
MGP_DBA2J_T0082181	-	1288	-	MGP_DBA2J_P0082181	287 (aa)	-	-
MGP_DBA2J_T0082182	-	1336	-	MGP_DBA2J_P0082182	287 (aa)	-	-
MGP_DBA2J_T0082183	-	1365	-	MGP_DBA2J_P0082183	287 (aa)	-	-
MGP_DBA2J_T0082184	-	968	-	MGP_DBA2J_P0082184	247 (aa)	-	-
MGP_DBA2J_T0082185	-	510	-	MGP_DBA2J_P0082185	44 (aa)	-	-
MGP_DBA2J_T0082186	-	1690	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0031724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0031724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0031724	Snrpa	97	55.235	MGP_DBA2J_G0026407	Snrpb2	99	63.121
MGP_DBA2J_G0031724	Snrpa	99	90.141	MGP_DBA2J_G0023046	Gm5145	100	90.141