EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0031784 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpl
Alias: C79783|D830027H13Rik|Hnrpl
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 13763 bases
Position: chr7:26709486-26723248
Accession: 104816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0082408	RRM_5	PF13893.6	2.4e-60	1	2
MGP_DBA2J_P0082408	RRM_5	PF13893.6	2.4e-60	2	2
MGP_DBA2J_P0082412	RRM_5	PF13893.6	2.4e-60	1	2
MGP_DBA2J_P0082412	RRM_5	PF13893.6	2.4e-60	2	2
MGP_DBA2J_P0082413	RRM_5	PF13893.6	2.9e-60	1	2
MGP_DBA2J_P0082413	RRM_5	PF13893.6	2.9e-60	2	2
MGP_DBA2J_P0082410	RRM_5	PF13893.6	1.9e-59	1	2
MGP_DBA2J_P0082410	RRM_5	PF13893.6	1.9e-59	2	2
MGP_DBA2J_P0082408	RRM_1	PF00076.22	3.3e-22	1	2
MGP_DBA2J_P0082408	RRM_1	PF00076.22	3.3e-22	2	2
MGP_DBA2J_P0082412	RRM_1	PF00076.22	3.3e-22	1	2
MGP_DBA2J_P0082412	RRM_1	PF00076.22	3.3e-22	2	2
MGP_DBA2J_P0082413	RRM_1	PF00076.22	4.2e-22	1	2
MGP_DBA2J_P0082413	RRM_1	PF00076.22	4.2e-22	2	2
MGP_DBA2J_P0082410	RRM_1	PF00076.22	1.6e-16	1	1
MGP_DBA2J_P0082411	RRM_1	PF00076.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0082420	-	666	-	-	- (aa)	-	-
MGP_DBA2J_T0082409	-	2275	-	-	- (aa)	-	-
MGP_DBA2J_T0082408	-	2673	XM_006539556	MGP_DBA2J_P0082408	586 (aa)	XP_006539619	Q8R081
MGP_DBA2J_T0082418	-	1087	-	-	- (aa)	-	-
MGP_DBA2J_T0082419	-	768	-	-	- (aa)	-	-
MGP_DBA2J_T0082416	-	504	-	-	- (aa)	-	-
MGP_DBA2J_T0082417	-	639	-	-	- (aa)	-	-
MGP_DBA2J_T0082414	-	2426	-	-	- (aa)	-	-
MGP_DBA2J_T0082415	-	1844	-	MGP_DBA2J_P0082415	201 (aa)	-	-
MGP_DBA2J_T0082412	-	2136	-	MGP_DBA2J_P0082412	586 (aa)	-	-
MGP_DBA2J_T0082413	-	2174	-	MGP_DBA2J_P0082413	614 (aa)	-	-
MGP_DBA2J_T0082410	-	1892	-	MGP_DBA2J_P0082410	456 (aa)	-	-
MGP_DBA2J_T0082411	-	502	-	MGP_DBA2J_P0082411	112 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0031784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0031784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0031784	Hnrnpl	77	30.645	MGP_DBA2J_G0027643	Ptbp2	77	30.645
MGP_DBA2J_G0031784	Hnrnpl	100	63.393	MGP_DBA2J_G0023881	Hnrnpll	80	58.065
MGP_DBA2J_G0031784	Hnrnpl	55	36.207	MGP_DBA2J_G0028152	Ptbp3	83	35.537
MGP_DBA2J_G0031784	Hnrnpl	95	30.045	MGP_DBA2J_G0017304	Ptbp1	80	30.583