EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0031811 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 15401 bases
Position: chr7:27789067-27804467
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_DBA2J_P0082546	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_DBA2J_P0082549	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_DBA2J_P0082546	zf-met	PF12874.7	8.3e-08	1	1
MGP_DBA2J_P0082549	zf-met	PF12874.7	8.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0082548	-	2976	-	-	- (aa)	-	-
MGP_DBA2J_T0082549	-	2744	-	MGP_DBA2J_P0082549	578 (aa)	-	-
MGP_DBA2J_T0082550	-	764	-	-	- (aa)	-	-
MGP_DBA2J_T0082546	-	2537	XM_006539873	MGP_DBA2J_P0082546	578 (aa)	XP_006539936	Q7TMN8
MGP_DBA2J_T0082547	-	689	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0031811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0031811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0031811	Zfp420	97	44.706	MGP_DBA2J_G0028860	Zbtb17	69	44.706
MGP_DBA2J_G0031811	Zfp420	98	47.967	MGP_DBA2J_G0032858	E430018J23Rik	67	47.967
MGP_DBA2J_G0031811	Zfp420	99	54.233	MGP_DBA2J_G0034293	Zfp872	86	53.608
MGP_DBA2J_G0031811	Zfp420	98	49.524	MGP_DBA2J_G0018185	Zfp672	89	49.524
MGP_DBA2J_G0031811	Zfp420	95	41.722	MGP_DBA2J_G0030651	Prdm5	91	48.387
MGP_DBA2J_G0031811	Zfp420	99	56.115	MGP_DBA2J_G0032855	Zfp768	51	56.071
MGP_DBA2J_G0031811	Zfp420	97	48.106	MGP_DBA2J_G0032859	-	81	48.106
MGP_DBA2J_G0031811	Zfp420	99	51.052	MGP_DBA2J_G0031941	Zfp715	71	51.316
MGP_DBA2J_G0031811	Zfp420	99	36.677	MGP_DBA2J_G0031677	Zfp574	93	37.533
MGP_DBA2J_G0031811	Zfp420	98	48.744	MGP_DBA2J_G0029321	Zbtb49	89	50.000
MGP_DBA2J_G0031811	Zfp420	99	57.692	MGP_DBA2J_G0033957	Zfp1	78	57.692
MGP_DBA2J_G0031811	Zfp420	97	41.080	MGP_DBA2J_G0023091	Zscan10	78	40.179
MGP_DBA2J_G0031811	Zfp420	98	54.648	MGP_DBA2J_G0023062	Zfp677	89	54.648
MGP_DBA2J_G0031811	Zfp420	98	55.210	MGP_DBA2J_G0023064	Zfp51	88	55.210
MGP_DBA2J_G0031811	Zfp420	95	59.426	MGP_DBA2J_G0026296	Zfp661	72	59.426
MGP_DBA2J_G0031811	Zfp420	98	56.182	MGP_DBA2J_G0020547	Zfp748	92	56.182
MGP_DBA2J_G0031811	Zfp420	98	39.286	MGP_DBA2J_G0026763	Zfp64	69	36.504
MGP_DBA2J_G0031811	Zfp420	99	60.656	MGP_DBA2J_G0021844	Zfp251	78	60.656
MGP_DBA2J_G0031811	Zfp420	99	50.270	MGP_DBA2J_G0023084	Zfp945	98	51.032
MGP_DBA2J_G0031811	Zfp420	97	56.897	MGP_DBA2J_G0030998	Zfp637	75	54.167
MGP_DBA2J_G0031811	Zfp420	98	50.000	MGP_DBA2J_G0033586	Zfp882	85	50.000
MGP_DBA2J_G0031811	Zfp420	95	30.691	MGP_DBA2J_G0031397	-	66	31.343
MGP_DBA2J_G0031811	Zfp420	99	56.553	MGP_DBA2J_G0031640	Zfp235	72	56.553
MGP_DBA2J_G0031811	Zfp420	98	53.378	MGP_DBA2J_G0031641	Zfp114	75	53.378
MGP_DBA2J_G0031811	Zfp420	98	55.274	MGP_DBA2J_G0031642	Zfp111	74	55.274
MGP_DBA2J_G0031811	Zfp420	99	56.356	MGP_DBA2J_G0031646	Zfp61	59	56.356
MGP_DBA2J_G0031811	Zfp420	99	57.095	MGP_DBA2J_G0031647	Zfp94	82	57.095
MGP_DBA2J_G0031811	Zfp420	99	51.196	MGP_DBA2J_G0020530	Zfp759	88	50.364
MGP_DBA2J_G0031811	Zfp420	98	37.309	MGP_DBA2J_G0033798	Zfp319	93	36.919
MGP_DBA2J_G0031811	Zfp420	98	38.136	MGP_DBA2J_G0031388	Zfp628	60	38.748
MGP_DBA2J_G0031811	Zfp420	98	48.507	MGP_DBA2J_G0029656	Gfi1	100	48.507
MGP_DBA2J_G0031811	Zfp420	99	52.489	MGP_DBA2J_G0026725	Zfp334	75	51.716
MGP_DBA2J_G0031811	Zfp420	99	47.059	MGP_DBA2J_G0024436	Zfp236	79	47.059
MGP_DBA2J_G0031811	Zfp420	99	55.556	MGP_DBA2J_G0031644	Zfp108	79	55.556
MGP_DBA2J_G0031811	Zfp420	98	46.711	MGP_DBA2J_G0030518	Repin1	93	46.711
MGP_DBA2J_G0031811	Zfp420	98	56.275	MGP_DBA2J_G0020529	Rslcan18	71	56.275
MGP_DBA2J_G0031811	Zfp420	98	52.317	MGP_DBA2J_G0031748	Zfp974	96	52.317
MGP_DBA2J_G0031811	Zfp420	98	51.882	MGP_DBA2J_G0018235	Zfp867	82	51.882
MGP_DBA2J_G0031811	Zfp420	98	53.074	MGP_DBA2J_G0031639	Zfp112	67	53.074
MGP_DBA2J_G0031811	Zfp420	99	37.634	MGP_DBA2J_G0031396	Zfp865	80	37.634
MGP_DBA2J_G0031811	Zfp420	98	59.532	MGP_DBA2J_G0018088	Zfp454	72	57.803