EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0032333 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 89858 bases
Position: chr7:91355568-91445425
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0084719	MMR_HSR1	PF01926.23	2.4e-05	1	1
MGP_DBA2J_P0084720	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0084720	-	1406	-	MGP_DBA2J_P0084720	203 (aa)	-	-
MGP_DBA2J_T0084719	-	2039	XM_006508293	MGP_DBA2J_P0084719	203 (aa)	XP_006508356	Q923S9
MGP_DBA2J_T0084721	-	1304	-	MGP_DBA2J_P0084721	175 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0032333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0032333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0032333	Rab30	81	51.176	MGP_DBA2J_G0035495	Rab33a	72	51.176
MGP_DBA2J_G0032333	Rab30	81	33.735	MGP_DBA2J_G0034983	Mras	79	33.735
MGP_DBA2J_G0032333	Rab30	80	42.331	MGP_DBA2J_G0026792	Rab22a	84	42.331
MGP_DBA2J_G0032333	Rab30	88	38.043	MGP_DBA2J_G0030824	Rab7	92	42.222
MGP_DBA2J_G0032333	Rab30	97	41.546	MGP_DBA2J_G0027227	Rab25	96	41.546
MGP_DBA2J_G0032333	Rab30	83	47.929	MGP_DBA2J_G0023961	Rab18	82	47.929
MGP_DBA2J_G0032333	Rab30	81	47.059	MGP_DBA2J_G0027024	Rab33b	74	47.059
MGP_DBA2J_G0032333	Rab30	78	48.447	MGP_DBA2J_G0035672	Rab39b	76	48.447
MGP_DBA2J_G0032333	Rab30	82	50.000	MGP_DBA2J_G0024526	Rab1b	83	50.000
MGP_DBA2J_G0032333	Rab30	80	48.466	MGP_DBA2J_G0019203	Rab37	75	48.466
MGP_DBA2J_G0032333	Rab30	83	42.857	MGP_DBA2J_G0017715	Rab5b	78	42.857
MGP_DBA2J_G0032333	Rab30	79	42.857	MGP_DBA2J_G0032392	Rab6a	77	42.857
MGP_DBA2J_G0032333	Rab30	89	34.426	MGP_DBA2J_G0033035	Hras	94	34.426
MGP_DBA2J_G0032333	Rab30	84	45.614	MGP_DBA2J_G0021123	Rab2b	81	48.718
MGP_DBA2J_G0032333	Rab30	77	35.625	MGP_DBA2J_G0018600	Rab34	62	35.625
MGP_DBA2J_G0032333	Rab30	87	33.146	MGP_DBA2J_G0031300	Kras	93	33.146
MGP_DBA2J_G0032333	Rab30	87	37.500	MGP_DBA2J_G0015746	Rab23	74	37.500
MGP_DBA2J_G0032333	Rab30	89	40.556	MGP_DBA2J_G0025495	Rab14	91	43.478
MGP_DBA2J_G0032333	Rab30	83	42.012	MGP_DBA2J_G0018999	Rab5c	78	42.012
MGP_DBA2J_G0032333	Rab30	82	31.737	MGP_DBA2J_G0029171	Rheb	88	31.737
MGP_DBA2J_G0032333	Rab30	97	37.981	MGP_DBA2J_G0034756	Rab11a	91	44.604
MGP_DBA2J_G0032333	Rab30	88	47.778	MGP_DBA2J_G0023815	Rab12	62	47.778
MGP_DBA2J_G0032333	Rab30	97	39.524	MGP_DBA2J_G0023366	Rab11b	96	39.524
MGP_DBA2J_G0032333	Rab30	90	42.391	MGP_DBA2J_G0027854	Rab2a	87	42.391
MGP_DBA2J_G0032333	Rab30	95	38.889	MGP_DBA2J_G0036077	Rab9	97	38.889
MGP_DBA2J_G0032333	Rab30	86	43.678	MGP_DBA2J_G0023717	Rab5a	81	43.678
MGP_DBA2J_G0032333	Rab30	79	39.157	MGP_DBA2J_G0035918	Rab9b	82	39.157
MGP_DBA2J_G0032333	Rab30	82	50.602	MGP_DBA2J_G0017903	Rab1a	81	50.602
MGP_DBA2J_G0032333	Rab30	81	32.317	MGP_DBA2J_G0031406	Rasl2-9	75	32.317
MGP_DBA2J_G0032333	Rab30	76	42.857	MGP_DBA2J_G0023806	Rab31	79	42.857
MGP_DBA2J_G0032333	Rab30	79	34.756	MGP_DBA2J_G0022070	Rabl2	70	34.756
MGP_DBA2J_G0032333	Rab30	86	50.286	MGP_DBA2J_G0029788	Rab35	86	50.286
MGP_DBA2J_G0032333	Rab30	79	41.615	MGP_DBA2J_G0035006	Rab6b	77	41.615
MGP_DBA2J_G0032333	Rab30	86	42.529	MGP_DBA2J_G0019695	Rab15	82	42.529
MGP_DBA2J_G0032333	Rab30	78	38.272	MGP_DBA2J_G0017188	Rab36	61	38.272
MGP_DBA2J_G0032333	Rab30	84	34.503	MGP_DBA2J_G0027508	Nras	96	34.932