EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0032782 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 71798 bases
Position: chr7:121937511-122009308
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0086074	Ago_hook	PF10427.9	3.4e-19	1	1
MGP_DBA2J_P0086071	Ago_hook	PF10427.9	6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0086069	-	640	-	-	- (aa)	-	-
MGP_DBA2J_T0086078	-	463	-	MGP_DBA2J_P0086078	154 (aa)	-	-
MGP_DBA2J_T0086079	-	3297	-	-	- (aa)	-	-
MGP_DBA2J_T0086074	-	5223	-	MGP_DBA2J_P0086074	1397 (aa)	-	-
MGP_DBA2J_T0086075	-	4312	-	-	- (aa)	-	-
MGP_DBA2J_T0086076	-	939	-	-	- (aa)	-	-
MGP_DBA2J_T0086077	-	606	-	-	- (aa)	-	-
MGP_DBA2J_T0086070	-	310	-	MGP_DBA2J_P0086070	53 (aa)	-	-
MGP_DBA2J_T0086071	-	8135	-	MGP_DBA2J_P0086071	1880 (aa)	-	-
MGP_DBA2J_T0086072	-	3577	-	MGP_DBA2J_P0086072	35 (aa)	-	-
MGP_DBA2J_T0086073	-	1783	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0032782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0032782	Tnrc6a	99	39.671	MGP_DBA2J_G0021935	Tnrc6b	98	37.120
MGP_DBA2J_G0032782	Tnrc6a	98	44.685	MGP_DBA2J_G0019280	Tnrc6c	99	40.570