EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0032849 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 18951 bases
Position: chr7:126017611-126036561
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0086485	MMR_HSR1	PF01926.23	2e-08	1	1
MGP_DBA2J_P0086484	MMR_HSR1	PF01926.23	3.5e-08	1	1
MGP_DBA2J_P0086482	MMR_HSR1	PF01926.23	5.1e-08	1	1
MGP_DBA2J_P0086481	MMR_HSR1	PF01926.23	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0086488	-	713	-	-	- (aa)	-	-
MGP_DBA2J_T0086481	-	1101	-	MGP_DBA2J_P0086481	366 (aa)	-	-
MGP_DBA2J_T0086480	-	571	-	-	- (aa)	-	-
MGP_DBA2J_T0086483	-	789	-	-	- (aa)	-	-
MGP_DBA2J_T0086482	-	1048	-	MGP_DBA2J_P0086482	328 (aa)	-	-
MGP_DBA2J_T0086485	-	599	-	MGP_DBA2J_P0086485	145 (aa)	-	-
MGP_DBA2J_T0086484	-	706	-	MGP_DBA2J_P0086484	186 (aa)	-	-
MGP_DBA2J_T0086487	-	242	-	-	- (aa)	-	-
MGP_DBA2J_T0086486	-	821	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0032849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0032849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0032849	Sept1	100	50.000	MGP_DBA2J_G0019278	Sept9	83	46.000
MGP_DBA2J_G0032849	Sept1	100	64.828	MGP_DBA2J_G0016188	Sept2	100	60.748
MGP_DBA2J_G0032849	Sept1	100	68.276	MGP_DBA2J_G0022450	Sept5	93	63.068
MGP_DBA2J_G0032849	Sept1	100	40.816	MGP_DBA2J_G0029571	Sept11	76	40.762
MGP_DBA2J_G0032849	Sept1	100	43.537	MGP_DBA2J_G0017091	Sept10	71	40.064
MGP_DBA2J_G0032849	Sept1	100	47.260	MGP_DBA2J_G0022313	Sept12	77	43.775
MGP_DBA2J_G0032849	Sept1	100	50.685	MGP_DBA2J_G0021970	Sept3	86	46.575
MGP_DBA2J_G0032849	Sept1	100	40.136	MGP_DBA2J_G0035436	Sept6	76	41.349
MGP_DBA2J_G0032849	Sept1	100	59.310	MGP_DBA2J_G0034309	Sept7	76	49.709
MGP_DBA2J_G0032849	Sept1	100	38.095	MGP_DBA2J_G0018134	Sept8	76	36.765
MGP_DBA2J_G0032849	Sept1	100	66.897	MGP_DBA2J_G0018739	Sept4	99	64.516