EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0032858 (Gene tree)
Gene ID: -
Gene Symbol: E430018J23Rik
Alias: AI480612
Full Name: RIKEN cDNA E430018J23 gene
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 3947 bases
Position: chr7:126199741-126203687
Accession: 2141981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0086508	zf-C2H2	PF00096.26	1.8e-48	1	9
MGP_DBA2J_P0086508	zf-C2H2	PF00096.26	1.8e-48	2	9
MGP_DBA2J_P0086508	zf-C2H2	PF00096.26	1.8e-48	3	9
MGP_DBA2J_P0086508	zf-C2H2	PF00096.26	1.8e-48	4	9
MGP_DBA2J_P0086508	zf-C2H2	PF00096.26	1.8e-48	5	9
MGP_DBA2J_P0086508	zf-C2H2	PF00096.26	1.8e-48	6	9
MGP_DBA2J_P0086508	zf-C2H2	PF00096.26	1.8e-48	7	9
MGP_DBA2J_P0086508	zf-C2H2	PF00096.26	1.8e-48	8	9
MGP_DBA2J_P0086508	zf-C2H2	PF00096.26	1.8e-48	9	9
MGP_DBA2J_P0086508	zf-met	PF12874.7	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0086508	-	3324	XM_006507163	MGP_DBA2J_P0086508	461 (aa)	XP_006507226	D3Z3V4

Gene Model

Click here to download MGP_DBA2J_G0032858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0032858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0032858	E430018J23Rik	89	46.964	MGP_DBA2J_G0031642	Zfp111	98	46.964
MGP_DBA2J_G0032858	E430018J23Rik	59	48.341	MGP_DBA2J_G0031646	Zfp61	52	48.341
MGP_DBA2J_G0032858	E430018J23Rik	61	44.498	MGP_DBA2J_G0030518	Repin1	92	44.076
MGP_DBA2J_G0032858	E430018J23Rik	61	48.879	MGP_DBA2J_G0031640	Zfp235	62	48.879
MGP_DBA2J_G0032858	E430018J23Rik	86	35.381	MGP_DBA2J_G0033957	Zfp1	98	35.381
MGP_DBA2J_G0032858	E430018J23Rik	62	45.299	MGP_DBA2J_G0031644	Zfp108	99	45.299
MGP_DBA2J_G0032858	E430018J23Rik	85	46.119	MGP_DBA2J_G0031647	Zfp94	96	46.119
MGP_DBA2J_G0032858	E430018J23Rik	86	41.045	MGP_DBA2J_G0034293	Zfp872	99	40.755
MGP_DBA2J_G0032858	E430018J23Rik	58	42.177	MGP_DBA2J_G0024436	Zfp236	58	42.177
MGP_DBA2J_G0032858	E430018J23Rik	85	44.318	MGP_DBA2J_G0020547	Zfp748	99	44.318
MGP_DBA2J_G0032858	E430018J23Rik	90	50.382	MGP_DBA2J_G0021844	Zfp251	94	50.382
MGP_DBA2J_G0032858	E430018J23Rik	62	45.000	MGP_DBA2J_G0029321	Zbtb49	64	47.945
MGP_DBA2J_G0032858	E430018J23Rik	74	47.410	MGP_DBA2J_G0031639	Zfp112	63	47.410
MGP_DBA2J_G0032858	E430018J23Rik	64	43.254	MGP_DBA2J_G0023091	Zscan10	78	43.254
MGP_DBA2J_G0032858	E430018J23Rik	91	47.445	MGP_DBA2J_G0023064	Zfp51	95	45.339
MGP_DBA2J_G0032858	E430018J23Rik	89	45.385	MGP_DBA2J_G0018088	Zfp454	99	44.019
MGP_DBA2J_G0032858	E430018J23Rik	88	42.647	MGP_DBA2J_G0020530	Zfp759	99	42.373
MGP_DBA2J_G0032858	E430018J23Rik	54	38.421	MGP_DBA2J_G0018821	Zfp652	51	32.808
MGP_DBA2J_G0032858	E430018J23Rik	69	36.765	MGP_DBA2J_G0033798	Zfp319	93	39.245
MGP_DBA2J_G0032858	E430018J23Rik	57	44.086	MGP_DBA2J_G0031677	Zfp574	71	38.961
MGP_DBA2J_G0032858	E430018J23Rik	60	35.593	MGP_DBA2J_G0031396	Zfp865	72	35.593
MGP_DBA2J_G0032858	E430018J23Rik	85	48.404	MGP_DBA2J_G0026296	Zfp661	94	42.857
MGP_DBA2J_G0032858	E430018J23Rik	61	42.798	MGP_DBA2J_G0018185	Zfp672	90	42.105
MGP_DBA2J_G0032858	E430018J23Rik	71	37.838	MGP_DBA2J_G0030651	Prdm5	74	37.838
MGP_DBA2J_G0032858	E430018J23Rik	62	46.415	MGP_DBA2J_G0031641	Zfp114	68	46.415
MGP_DBA2J_G0032858	E430018J23Rik	79	45.070	MGP_DBA2J_G0031941	Zfp715	74	45.070
MGP_DBA2J_G0032858	E430018J23Rik	90	47.390	MGP_DBA2J_G0020529	Rslcan18	82	47.390
MGP_DBA2J_G0032858	E430018J23Rik	71	32.389	MGP_DBA2J_G0026763	Zfp64	70	32.389
MGP_DBA2J_G0032858	E430018J23Rik	67	47.967	MGP_DBA2J_G0031811	Zfp420	98	47.967
MGP_DBA2J_G0032858	E430018J23Rik	60	48.421	MGP_DBA2J_G0031388	Zfp628	60	47.264
MGP_DBA2J_G0032858	E430018J23Rik	57	44.503	MGP_DBA2J_G0030998	Zfp637	84	44.330
MGP_DBA2J_G0032858	E430018J23Rik	92	41.985	MGP_DBA2J_G0023062	Zfp677	99	41.985
MGP_DBA2J_G0032858	E430018J23Rik	86	39.583	MGP_DBA2J_G0018235	Zfp867	95	39.583
MGP_DBA2J_G0032858	E430018J23Rik	86	43.798	MGP_DBA2J_G0033586	Zfp882	99	43.798
MGP_DBA2J_G0032858	E430018J23Rik	60	42.197	MGP_DBA2J_G0029656	Gfi1	99	45.038
MGP_DBA2J_G0032858	E430018J23Rik	60	47.511	MGP_DBA2J_G0032855	Zfp768	50	47.321
MGP_DBA2J_G0032858	E430018J23Rik	77	79.775	MGP_DBA2J_G0032859	-	100	79.775
MGP_DBA2J_G0032858	E430018J23Rik	57	41.702	MGP_DBA2J_G0031748	Zfp974	85	41.702
MGP_DBA2J_G0032858	E430018J23Rik	87	44.000	MGP_DBA2J_G0026725	Zfp334	99	44.000
MGP_DBA2J_G0032858	E430018J23Rik	92	42.073	MGP_DBA2J_G0023084	Zfp945	98	42.073