EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0086759	RRM_1	PF00076.22	2.2e-63	1	3
MGP_DBA2J_P0086759	RRM_1	PF00076.22	2.2e-63	2	3
MGP_DBA2J_P0086759	RRM_1	PF00076.22	2.2e-63	3	3
MGP_DBA2J_P0086762	RRM_1	PF00076.22	2.2e-63	1	3
MGP_DBA2J_P0086762	RRM_1	PF00076.22	2.2e-63	2	3
MGP_DBA2J_P0086762	RRM_1	PF00076.22	2.2e-63	3	3
MGP_DBA2J_P0086756	RRM_1	PF00076.22	3.1e-60	1	3
MGP_DBA2J_P0086756	RRM_1	PF00076.22	3.1e-60	2	3
MGP_DBA2J_P0086756	RRM_1	PF00076.22	3.1e-60	3	3
MGP_DBA2J_P0086758	RRM_1	PF00076.22	7.6e-51	1	3
MGP_DBA2J_P0086758	RRM_1	PF00076.22	7.6e-51	2	3
MGP_DBA2J_P0086758	RRM_1	PF00076.22	7.6e-51	3	3
MGP_DBA2J_P0086764	RRM_1	PF00076.22	1.8e-26	1	2
MGP_DBA2J_P0086764	RRM_1	PF00076.22	1.8e-26	2	2
MGP_DBA2J_P0086763	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0086764	-	1344	-	MGP_DBA2J_P0086764	244 (aa)	-	-
MGP_DBA2J_T0086765	-	784	-	MGP_DBA2J_P0086765	41 (aa)	-	-
MGP_DBA2J_T0086768	-	1808	-	-	- (aa)	-	-
MGP_DBA2J_T0086769	-	674	-	-	- (aa)	-	-
MGP_DBA2J_T0086757	-	4266	-	-	- (aa)	-	-
MGP_DBA2J_T0086756	-	4451	XM_006507570	MGP_DBA2J_P0086756	392 (aa)	XP_006507633	P70318
MGP_DBA2J_T0086760	-	953	-	MGP_DBA2J_P0086760	106 (aa)	-	-
MGP_DBA2J_T0086761	-	2319	-	MGP_DBA2J_P0086761	135 (aa)	-	-
MGP_DBA2J_T0086762	-	1580	-	MGP_DBA2J_P0086762	375 (aa)	-	-
MGP_DBA2J_T0086763	-	562	-	MGP_DBA2J_P0086763	107 (aa)	-	-
MGP_DBA2J_T0086759	-	2033	-	MGP_DBA2J_P0086759	375 (aa)	-	-
MGP_DBA2J_T0086758	-	2835	-	MGP_DBA2J_P0086758	336 (aa)	-	-
MGP_DBA2J_T0086766	-	560	-	-	- (aa)	-	-
MGP_DBA2J_T0086767	-	804	-	MGP_DBA2J_P0086767	140 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0032905	Tial1	72	34.615	MGP_DBA2J_G0028258	Elavl2	93	34.615
MGP_DBA2J_G0032905	Tial1	73	35.897	MGP_DBA2J_G0028389	Elavl4	88	35.897
MGP_DBA2J_G0032905	Tial1	84	30.088	MGP_DBA2J_G0024506	Rbm4	94	30.345
MGP_DBA2J_G0032905	Tial1	81	31.111	MGP_DBA2J_G0019302	Rbfox3	53	31.868
MGP_DBA2J_G0032905	Tial1	69	31.469	MGP_DBA2J_G0029782	Msi1	56	41.379
MGP_DBA2J_G0032905	Tial1	67	30.769	MGP_DBA2J_G0033155	Elavl1	95	30.769
MGP_DBA2J_G0032905	Tial1	67	40.244	MGP_DBA2J_G0017327	Cirbp	85	40.244
MGP_DBA2J_G0032905	Tial1	99	31.618	MGP_DBA2J_G0027016	Pabpc4l	94	33.333
MGP_DBA2J_G0032905	Tial1	92	32.500	MGP_DBA2J_G0024202	Pabpc2	50	35.036
MGP_DBA2J_G0032905	Tial1	53	32.143	MGP_DBA2J_G0034715	Celf6	54	31.818
MGP_DBA2J_G0032905	Tial1	73	32.000	MGP_DBA2J_G0027157	Rbm46	52	30.000
MGP_DBA2J_G0032905	Tial1	94	31.783	MGP_DBA2J_G0022975	Pabpc6	56	34.014
MGP_DBA2J_G0032905	Tial1	62	32.184	MGP_DBA2J_G0022560	Ncbp2	71	33.333
MGP_DBA2J_G0032905	Tial1	94	31.008	MGP_DBA2J_G0021631	Pabpc1	56	34.783
MGP_DBA2J_G0032905	Tial1	64	31.461	MGP_DBA2J_G0035549	Rbmx	90	32.258
MGP_DBA2J_G0032905	Tial1	73	37.179	MGP_DBA2J_G0034286	Elavl3	90	37.179
MGP_DBA2J_G0032905	Tial1	65	31.481	MGP_DBA2J_G0025176	Celf2	61	34.177
MGP_DBA2J_G0032905	Tial1	81	37.333	MGP_DBA2J_G0027374	Celf3	70	34.091
MGP_DBA2J_G0032905	Tial1	94	30.233	MGP_DBA2J_G0028550	Pabpc4	100	33.333
MGP_DBA2J_G0032905	Tial1	73	33.019	MGP_DBA2J_G0028679	Trnau1ap	60	32.386
MGP_DBA2J_G0032905	Tial1	100	87.440	MGP_DBA2J_G0030794	Tia1	97	86.992