EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0033957 (Gene tree)
Gene ID: -
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 27660 bases
Position: chr8:109060835-109088494
Accession: 99154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0090255	zf-C2H2	PF00096.26	2.1e-51	1	8
MGP_DBA2J_P0090255	zf-C2H2	PF00096.26	2.1e-51	2	8
MGP_DBA2J_P0090255	zf-C2H2	PF00096.26	2.1e-51	3	8
MGP_DBA2J_P0090255	zf-C2H2	PF00096.26	2.1e-51	4	8
MGP_DBA2J_P0090255	zf-C2H2	PF00096.26	2.1e-51	5	8
MGP_DBA2J_P0090255	zf-C2H2	PF00096.26	2.1e-51	6	8
MGP_DBA2J_P0090255	zf-C2H2	PF00096.26	2.1e-51	7	8
MGP_DBA2J_P0090255	zf-C2H2	PF00096.26	2.1e-51	8	8
MGP_DBA2J_P0090255	zf-met	PF12874.7	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0090255	-	1871	XM_011248348	MGP_DBA2J_P0090255	403 (aa)	XP_011246650	Q3UI68

Gene Model

Click here to download MGP_DBA2J_G0033957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0033957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0033957	Zfp1	99	40.144	MGP_DBA2J_G0018235	Zfp867	95	39.600
MGP_DBA2J_G0033957	Zfp1	98	50.185	MGP_DBA2J_G0031647	Zfp94	96	50.185
MGP_DBA2J_G0033957	Zfp1	92	55.319	MGP_DBA2J_G0031644	Zfp108	99	52.525
MGP_DBA2J_G0033957	Zfp1	60	43.478	MGP_DBA2J_G0029656	Gfi1	100	46.457
MGP_DBA2J_G0033957	Zfp1	75	40.183	MGP_DBA2J_G0033798	Zfp319	90	40.183
MGP_DBA2J_G0033957	Zfp1	79	45.607	MGP_DBA2J_G0031748	Zfp974	85	47.297
MGP_DBA2J_G0033957	Zfp1	98	45.113	MGP_DBA2J_G0034293	Zfp872	99	45.113
MGP_DBA2J_G0033957	Zfp1	98	47.059	MGP_DBA2J_G0021844	Zfp251	94	47.059
MGP_DBA2J_G0033957	Zfp1	99	42.769	MGP_DBA2J_G0033586	Zfp882	99	45.349
MGP_DBA2J_G0033957	Zfp1	78	57.692	MGP_DBA2J_G0031811	Zfp420	99	57.692
MGP_DBA2J_G0033957	Zfp1	60	46.429	MGP_DBA2J_G0031388	Zfp628	60	46.073
MGP_DBA2J_G0033957	Zfp1	79	46.460	MGP_DBA2J_G0023091	Zscan10	83	46.053
MGP_DBA2J_G0033957	Zfp1	98	51.440	MGP_DBA2J_G0031941	Zfp715	95	51.440
MGP_DBA2J_G0033957	Zfp1	100	42.857	MGP_DBA2J_G0026725	Zfp334	99	50.427
MGP_DBA2J_G0033957	Zfp1	99	52.036	MGP_DBA2J_G0023084	Zfp945	99	52.036
MGP_DBA2J_G0033957	Zfp1	67	46.559	MGP_DBA2J_G0018185	Zfp672	90	46.559
MGP_DBA2J_G0033957	Zfp1	98	49.145	MGP_DBA2J_G0020547	Zfp748	99	49.145
MGP_DBA2J_G0033957	Zfp1	99	48.548	MGP_DBA2J_G0020529	Rslcan18	86	48.548
MGP_DBA2J_G0033957	Zfp1	67	39.791	MGP_DBA2J_G0031396	Zfp865	80	39.286
MGP_DBA2J_G0033957	Zfp1	63	39.716	MGP_DBA2J_G0030518	Repin1	93	39.716
MGP_DBA2J_G0033957	Zfp1	100	51.739	MGP_DBA2J_G0031642	Zfp111	99	51.739
MGP_DBA2J_G0033957	Zfp1	79	56.522	MGP_DBA2J_G0031641	Zfp114	69	56.522
MGP_DBA2J_G0033957	Zfp1	88	55.319	MGP_DBA2J_G0031640	Zfp235	80	55.319
MGP_DBA2J_G0033957	Zfp1	78	61.905	MGP_DBA2J_G0031646	Zfp61	60	61.905
MGP_DBA2J_G0033957	Zfp1	99	48.828	MGP_DBA2J_G0018088	Zfp454	98	48.828
MGP_DBA2J_G0033957	Zfp1	98	38.214	MGP_DBA2J_G0020530	Zfp759	99	38.214
MGP_DBA2J_G0033957	Zfp1	64	43.137	MGP_DBA2J_G0026763	Zfp64	70	43.137
MGP_DBA2J_G0033957	Zfp1	79	40.594	MGP_DBA2J_G0031677	Zfp574	71	40.594
MGP_DBA2J_G0033957	Zfp1	67	42.083	MGP_DBA2J_G0028860	Zbtb17	54	46.512
MGP_DBA2J_G0033957	Zfp1	98	41.190	MGP_DBA2J_G0026296	Zfp661	96	41.190
MGP_DBA2J_G0033957	Zfp1	99	45.076	MGP_DBA2J_G0023062	Zfp677	99	52.263
MGP_DBA2J_G0033957	Zfp1	99	47.926	MGP_DBA2J_G0023064	Zfp51	94	47.926
MGP_DBA2J_G0033957	Zfp1	67	45.652	MGP_DBA2J_G0024436	Zfp236	60	45.652
MGP_DBA2J_G0033957	Zfp1	63	49.485	MGP_DBA2J_G0029321	Zbtb49	76	48.611
MGP_DBA2J_G0033957	Zfp1	63	45.000	MGP_DBA2J_G0032859	-	78	45.000
MGP_DBA2J_G0033957	Zfp1	98	35.381	MGP_DBA2J_G0032858	E430018J23Rik	86	35.381
MGP_DBA2J_G0033957	Zfp1	80	52.252	MGP_DBA2J_G0032855	Zfp768	51	52.018
MGP_DBA2J_G0033957	Zfp1	80	57.534	MGP_DBA2J_G0031639	Zfp112	57	57.534
MGP_DBA2J_G0033957	Zfp1	77	57.042	MGP_DBA2J_G0030998	Zfp637	91	57.042
MGP_DBA2J_G0033957	Zfp1	67	40.167	MGP_DBA2J_G0030651	Prdm5	67	50.847