EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0034293 (Gene tree)
Gene ID: -
Gene Symbol: Zfp872
Alias: 9530015I07Rik
Full Name: zinc finger protein 872
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 16939 bases
Position: chr9:19067940-19084878
Accession: 3588272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0091217	zf-C2H2	PF00096.26	6.1e-50	1	9
MGP_DBA2J_P0091217	zf-C2H2	PF00096.26	6.1e-50	2	9
MGP_DBA2J_P0091217	zf-C2H2	PF00096.26	6.1e-50	3	9
MGP_DBA2J_P0091217	zf-C2H2	PF00096.26	6.1e-50	4	9
MGP_DBA2J_P0091217	zf-C2H2	PF00096.26	6.1e-50	5	9
MGP_DBA2J_P0091217	zf-C2H2	PF00096.26	6.1e-50	6	9
MGP_DBA2J_P0091217	zf-C2H2	PF00096.26	6.1e-50	7	9
MGP_DBA2J_P0091217	zf-C2H2	PF00096.26	6.1e-50	8	9
MGP_DBA2J_P0091217	zf-C2H2	PF00096.26	6.1e-50	9	9
MGP_DBA2J_P0091216	zf-C2H2	PF00096.26	6.4e-50	1	9
MGP_DBA2J_P0091216	zf-C2H2	PF00096.26	6.4e-50	2	9
MGP_DBA2J_P0091216	zf-C2H2	PF00096.26	6.4e-50	3	9
MGP_DBA2J_P0091216	zf-C2H2	PF00096.26	6.4e-50	4	9
MGP_DBA2J_P0091216	zf-C2H2	PF00096.26	6.4e-50	5	9
MGP_DBA2J_P0091216	zf-C2H2	PF00096.26	6.4e-50	6	9
MGP_DBA2J_P0091216	zf-C2H2	PF00096.26	6.4e-50	7	9
MGP_DBA2J_P0091216	zf-C2H2	PF00096.26	6.4e-50	8	9
MGP_DBA2J_P0091216	zf-C2H2	PF00096.26	6.4e-50	9	9
MGP_DBA2J_P0091217	zf-met	PF12874.7	8.9e-05	1	1
MGP_DBA2J_P0091216	zf-met	PF12874.7	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0091216	-	2958	-	MGP_DBA2J_P0091216	465 (aa)	-	F7APL9
MGP_DBA2J_T0091217	-	1395	-	MGP_DBA2J_P0091217	464 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0034293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0034293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0034293	Zfp872	86	43.011	MGP_DBA2J_G0031748	Zfp974	86	43.370
MGP_DBA2J_G0034293	Zfp872	80	44.330	MGP_DBA2J_G0029321	Zbtb49	78	44.444
MGP_DBA2J_G0034293	Zfp872	87	38.342	MGP_DBA2J_G0018821	Zfp652	69	36.054
MGP_DBA2J_G0034293	Zfp872	99	48.746	MGP_DBA2J_G0026296	Zfp661	94	48.507
MGP_DBA2J_G0034293	Zfp872	99	45.113	MGP_DBA2J_G0033957	Zfp1	98	45.113
MGP_DBA2J_G0034293	Zfp872	99	43.702	MGP_DBA2J_G0023064	Zfp51	94	44.444
MGP_DBA2J_G0034293	Zfp872	99	45.773	MGP_DBA2J_G0023062	Zfp677	98	45.773
MGP_DBA2J_G0034293	Zfp872	99	43.333	MGP_DBA2J_G0023084	Zfp945	95	44.904
MGP_DBA2J_G0034293	Zfp872	80	34.050	MGP_DBA2J_G0026763	Zfp64	71	34.082
MGP_DBA2J_G0034293	Zfp872	81	47.191	MGP_DBA2J_G0031388	Zfp628	60	46.114
MGP_DBA2J_G0034293	Zfp872	84	46.226	MGP_DBA2J_G0031677	Zfp574	93	46.226
MGP_DBA2J_G0034293	Zfp872	99	40.530	MGP_DBA2J_G0030651	Prdm5	82	40.076
MGP_DBA2J_G0034293	Zfp872	94	40.800	MGP_DBA2J_G0024436	Zfp236	62	44.318
MGP_DBA2J_G0034293	Zfp872	80	35.266	MGP_DBA2J_G0031399	Zfp784	77	34.762
MGP_DBA2J_G0034293	Zfp872	99	53.571	MGP_DBA2J_G0021844	Zfp251	68	54.027
MGP_DBA2J_G0034293	Zfp872	82	34.140	MGP_DBA2J_G0033798	Zfp319	90	34.722
MGP_DBA2J_G0034293	Zfp872	88	51.672	MGP_DBA2J_G0031639	Zfp112	69	52.038
MGP_DBA2J_G0034293	Zfp872	97	39.935	MGP_DBA2J_G0023091	Zscan10	80	39.935
MGP_DBA2J_G0034293	Zfp872	78	44.030	MGP_DBA2J_G0029656	Gfi1	100	44.030
MGP_DBA2J_G0034293	Zfp872	99	39.823	MGP_DBA2J_G0026725	Zfp334	99	41.827
MGP_DBA2J_G0034293	Zfp872	99	47.684	MGP_DBA2J_G0020547	Zfp748	99	48.459
MGP_DBA2J_G0034293	Zfp872	99	53.118	MGP_DBA2J_G0018235	Zfp867	95	53.187
MGP_DBA2J_G0034293	Zfp872	86	53.608	MGP_DBA2J_G0031811	Zfp420	99	54.233
MGP_DBA2J_G0034293	Zfp872	71	44.758	MGP_DBA2J_G0032859	-	75	45.570
MGP_DBA2J_G0034293	Zfp872	99	40.755	MGP_DBA2J_G0032858	E430018J23Rik	86	41.045
MGP_DBA2J_G0034293	Zfp872	84	48.162	MGP_DBA2J_G0032855	Zfp768	51	47.426
MGP_DBA2J_G0034293	Zfp872	93	34.726	MGP_DBA2J_G0018185	Zfp672	100	40.000
MGP_DBA2J_G0034293	Zfp872	100	50.368	MGP_DBA2J_G0020529	Rslcan18	80	47.959
MGP_DBA2J_G0034293	Zfp872	99	50.284	MGP_DBA2J_G0033586	Zfp882	97	44.991
MGP_DBA2J_G0034293	Zfp872	83	41.964	MGP_DBA2J_G0028860	Zbtb17	56	42.638
MGP_DBA2J_G0034293	Zfp872	99	46.667	MGP_DBA2J_G0018088	Zfp454	98	46.667
MGP_DBA2J_G0034293	Zfp872	99	48.447	MGP_DBA2J_G0020530	Zfp759	99	46.000
MGP_DBA2J_G0034293	Zfp872	95	51.220	MGP_DBA2J_G0031941	Zfp715	75	51.220
MGP_DBA2J_G0034293	Zfp872	95	51.163	MGP_DBA2J_G0031644	Zfp108	66	49.333
MGP_DBA2J_G0034293	Zfp872	95	45.552	MGP_DBA2J_G0031647	Zfp94	96	45.552
MGP_DBA2J_G0034293	Zfp872	94	58.140	MGP_DBA2J_G0031646	Zfp61	63	58.140
MGP_DBA2J_G0034293	Zfp872	93	51.163	MGP_DBA2J_G0031641	Zfp114	56	49.000
MGP_DBA2J_G0034293	Zfp872	94	48.159	MGP_DBA2J_G0031640	Zfp235	75	48.571
MGP_DBA2J_G0034293	Zfp872	95	51.163	MGP_DBA2J_G0031642	Zfp111	99	47.880
MGP_DBA2J_G0034293	Zfp872	96	33.159	MGP_DBA2J_G0030518	Repin1	98	33.159
MGP_DBA2J_G0034293	Zfp872	84	44.156	MGP_DBA2J_G0031396	Zfp865	78	35.776
MGP_DBA2J_G0034293	Zfp872	96	53.982	MGP_DBA2J_G0030998	Zfp637	88	53.982