EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0034756 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 26369 bases
Position: chr9:62015787-62042155
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0092547	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_DBA2J_P0092548	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_DBA2J_P0092542	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0092545	-	500	-	MGP_DBA2J_P0092545	86 (aa)	-	-
MGP_DBA2J_T0092544	-	603	-	-	- (aa)	-	-
MGP_DBA2J_T0092547	-	462	-	MGP_DBA2J_P0092547	153 (aa)	-	-
MGP_DBA2J_T0092546	-	397	-	-	- (aa)	-	-
MGP_DBA2J_T0092543	-	726	-	MGP_DBA2J_P0092543	86 (aa)	-	-
MGP_DBA2J_T0092542	-	6233	-	MGP_DBA2J_P0092542	216 (aa)	-	P62492
MGP_DBA2J_T0092549	-	695	-	-	- (aa)	-	-
MGP_DBA2J_T0092548	-	595	-	MGP_DBA2J_P0092548	155 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0034756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0034756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0034756	Rab11a	81	34.127	MGP_DBA2J_G0031300	Kras	87	37.725
MGP_DBA2J_G0034756	Rab11a	94	39.423	MGP_DBA2J_G0036077	Rab9	97	39.423
MGP_DBA2J_G0034756	Rab11a	87	38.686	MGP_DBA2J_G0030824	Rab7	93	42.857
MGP_DBA2J_G0034756	Rab11a	89	42.143	MGP_DBA2J_G0035918	Rab9b	86	41.040
MGP_DBA2J_G0034756	Rab11a	76	31.667	MGP_DBA2J_G0019042	Arl4d	58	31.667
MGP_DBA2J_G0034756	Rab11a	90	43.066	MGP_DBA2J_G0026792	Rab22a	81	42.038
MGP_DBA2J_G0034756	Rab11a	100	96.078	MGP_DBA2J_G0023366	Rab11b	100	90.367
MGP_DBA2J_G0034756	Rab11a	88	49.265	MGP_DBA2J_G0035672	Rab39b	82	46.857
MGP_DBA2J_G0034756	Rab11a	93	41.379	MGP_DBA2J_G0027024	Rab33b	85	37.799
MGP_DBA2J_G0034756	Rab11a	81	34.921	MGP_DBA2J_G0027508	Nras	95	37.931
MGP_DBA2J_G0034756	Rab11a	90	40.426	MGP_DBA2J_G0035495	Rab33a	74	39.665
MGP_DBA2J_G0034756	Rab11a	95	54.110	MGP_DBA2J_G0025495	Rab14	97	54.422
MGP_DBA2J_G0034756	Rab11a	88	48.889	MGP_DBA2J_G0017715	Rab5b	75	47.205
MGP_DBA2J_G0034756	Rab11a	68	30.065	MGP_DBA2J_G0016365	Arl8a	77	30.065
MGP_DBA2J_G0034756	Rab11a	100	50.000	MGP_DBA2J_G0017903	Rab1a	85	52.299
MGP_DBA2J_G0034756	Rab11a	93	42.254	MGP_DBA2J_G0023806	Rab31	86	41.071
MGP_DBA2J_G0034756	Rab11a	84	38.281	MGP_DBA2J_G0032392	Rab6a	84	35.955
MGP_DBA2J_G0034756	Rab11a	97	52.201	MGP_DBA2J_G0024526	Rab1b	84	55.357
MGP_DBA2J_G0034756	Rab11a	88	35.821	MGP_DBA2J_G0035006	Rab6b	77	35.404
MGP_DBA2J_G0034756	Rab11a	94	35.780	MGP_DBA2J_G0017188	Rab36	79	35.780
MGP_DBA2J_G0034756	Rab11a	91	44.604	MGP_DBA2J_G0032333	Rab30	97	37.981
MGP_DBA2J_G0034756	Rab11a	95	70.748	MGP_DBA2J_G0027227	Rab25	99	62.150
MGP_DBA2J_G0034756	Rab11a	86	34.586	MGP_DBA2J_G0029171	Rheb	89	32.927
MGP_DBA2J_G0034756	Rab11a	91	46.763	MGP_DBA2J_G0019695	Rab15	93	40.887
MGP_DBA2J_G0034756	Rab11a	75	40.000	MGP_DBA2J_G0022070	Rabl2	67	37.908
MGP_DBA2J_G0034756	Rab11a	91	56.115	MGP_DBA2J_G0021123	Rab2b	95	51.366
MGP_DBA2J_G0034756	Rab11a	81	34.921	MGP_DBA2J_G0033035	Hras	85	37.654
MGP_DBA2J_G0034756	Rab11a	93	48.252	MGP_DBA2J_G0023961	Rab18	78	47.531
MGP_DBA2J_G0034756	Rab11a	88	31.293	MGP_DBA2J_G0030198	Rasl11a	60	31.293
MGP_DBA2J_G0034756	Rab11a	74	30.303	MGP_DBA2J_G0019395	Dnajc27	60	30.303
MGP_DBA2J_G0034756	Rab11a	79	39.669	MGP_DBA2J_G0031406	Rasl2-9	70	36.364
MGP_DBA2J_G0034756	Rab11a	88	48.148	MGP_DBA2J_G0023717	Rab5a	91	41.951
MGP_DBA2J_G0034756	Rab11a	92	34.752	MGP_DBA2J_G0015746	Rab23	80	32.984
MGP_DBA2J_G0034756	Rab11a	78	31.746	MGP_DBA2J_G0019532	Arl4a	60	31.746
MGP_DBA2J_G0034756	Rab11a	91	56.835	MGP_DBA2J_G0027854	Rab2a	81	54.971
MGP_DBA2J_G0034756	Rab11a	81	31.746	MGP_DBA2J_G0034983	Mras	85	32.768
MGP_DBA2J_G0034756	Rab11a	90	49.635	MGP_DBA2J_G0029788	Rab35	99	42.512
MGP_DBA2J_G0034756	Rab11a	89	43.885	MGP_DBA2J_G0019203	Rab37	77	45.181
MGP_DBA2J_G0034756	Rab11a	90	43.796	MGP_DBA2J_G0023815	Rab12	70	37.799
MGP_DBA2J_G0034756	Rab11a	88	49.630	MGP_DBA2J_G0018999	Rab5c	90	41.262