EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0035211 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 1059448 bases
Position: chr9:114227225-115286672
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0094823	RRM_1	PF00076.22	1.5e-32	1	2
MGP_DBA2J_P0094823	RRM_1	PF00076.22	1.5e-32	2	2
MGP_DBA2J_P0094820	RRM_1	PF00076.22	1.2e-31	1	2
MGP_DBA2J_P0094820	RRM_1	PF00076.22	1.2e-31	2	2
MGP_DBA2J_P0094817	RRM_1	PF00076.22	1.4e-31	1	2
MGP_DBA2J_P0094817	RRM_1	PF00076.22	1.4e-31	2	2
MGP_DBA2J_P0094815	RRM_1	PF00076.22	1.5e-31	1	2
MGP_DBA2J_P0094815	RRM_1	PF00076.22	1.5e-31	2	2
MGP_DBA2J_P0094819	RRM_1	PF00076.22	1.5e-31	1	2
MGP_DBA2J_P0094819	RRM_1	PF00076.22	1.5e-31	2	2
MGP_DBA2J_P0094814	RRM_1	PF00076.22	1.7e-31	1	2
MGP_DBA2J_P0094814	RRM_1	PF00076.22	1.7e-31	2	2
MGP_DBA2J_P0094818	RRM_1	PF00076.22	2e-31	1	2
MGP_DBA2J_P0094818	RRM_1	PF00076.22	2e-31	2	2
MGP_DBA2J_P0094821	RRM_1	PF00076.22	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0094815	-	3315	-	MGP_DBA2J_P0094815	414 (aa)	-	-
MGP_DBA2J_T0094814	-	7904	XM_017313248	MGP_DBA2J_P0094814	431 (aa)	XP_017168737	Q8BWL5
MGP_DBA2J_T0094817	-	2166	-	MGP_DBA2J_P0094817	402 (aa)	-	-
MGP_DBA2J_T0094816	-	1626	-	MGP_DBA2J_P0094816	185 (aa)	-	-
MGP_DBA2J_T0094820	-	1984	-	MGP_DBA2J_P0094820	386 (aa)	-	-
MGP_DBA2J_T0094821	-	585	-	MGP_DBA2J_P0094821	194 (aa)	-	-
MGP_DBA2J_T0094822	-	2027	-	-	- (aa)	-	-
MGP_DBA2J_T0094823	-	619	-	MGP_DBA2J_P0094823	206 (aa)	-	-
MGP_DBA2J_T0094819	-	2236	-	MGP_DBA2J_P0094819	415 (aa)	-	-
MGP_DBA2J_T0094818	-	2128	-	MGP_DBA2J_P0094818	463 (aa)	-	-
MGP_DBA2J_T0094824	-	1438	-	-	- (aa)	-	-
MGP_DBA2J_T0094825	-	1753	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0035211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0035211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0035211	Rbms3	77	33.708	MGP_DBA2J_G0022975	Pabpc6	59	34.091
MGP_DBA2J_G0035211	Rbms3	83	37.222	MGP_DBA2J_G0028258	Elavl2	69	37.209
MGP_DBA2J_G0035211	Rbms3	82	42.105	MGP_DBA2J_G0034715	Celf6	52	42.105
MGP_DBA2J_G0035211	Rbms3	72	40.789	MGP_DBA2J_G0024042	Celf4	68	40.789
MGP_DBA2J_G0035211	Rbms3	97	34.356	MGP_DBA2J_G0033155	Elavl1	91	34.356
MGP_DBA2J_G0035211	Rbms3	68	43.421	MGP_DBA2J_G0025972	Celf1	53	43.421
MGP_DBA2J_G0035211	Rbms3	83	37.097	MGP_DBA2J_G0028389	Elavl4	70	36.458
MGP_DBA2J_G0035211	Rbms3	76	39.474	MGP_DBA2J_G0027374	Celf3	91	39.474
MGP_DBA2J_G0035211	Rbms3	99	80.841	MGP_DBA2J_G0025607	Rbms1	96	71.538
MGP_DBA2J_G0035211	Rbms3	83	80.663	MGP_DBA2J_G0017687	Rbms2	86	66.758
MGP_DBA2J_G0035211	Rbms3	75	37.079	MGP_DBA2J_G0025176	Celf2	77	39.474
MGP_DBA2J_G0035211	Rbms3	70	38.562	MGP_DBA2J_G0034286	Elavl3	63	37.931
MGP_DBA2J_G0035211	Rbms3	77	30.818	MGP_DBA2J_G0026666	Pabpc1l	59	30.818