EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0035350 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 6688 bases
Position: chrX:2746824-2753511
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0095290	RRM_1	PF00076.22	1.8e-24	1	1
MGP_DBA2J_P0095289	RRM_1	PF00076.22	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0095289	-	2792	-	MGP_DBA2J_P0095289	154 (aa)	-	-
MGP_DBA2J_T0095288	-	2234	-	-	- (aa)	-	-
MGP_DBA2J_T0095290	-	969	-	MGP_DBA2J_P0095290	153 (aa)	-	-
MGP_DBA2J_T0095291	-	1055	-	MGP_DBA2J_P0095291	90 (aa)	-	-
MGP_DBA2J_T0095292	-	1208	-	-	- (aa)	-	-
MGP_DBA2J_T0095293	-	721	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0035350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0035350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0035350	Rbm3	80	36.709	MGP_DBA2J_G0029593	Hnrnpd	70	34.667
MGP_DBA2J_G0035350	Rbm3	78	55.714	MGP_DBA2J_G0035549	Rbmx	79	56.790
MGP_DBA2J_G0035350	Rbm3	82	38.710	MGP_DBA2J_G0028389	Elavl4	58	31.646
MGP_DBA2J_G0035350	Rbm3	73	33.333	MGP_DBA2J_G0029910	Snrnp35	55	34.848
MGP_DBA2J_G0035350	Rbm3	90	39.326	MGP_DBA2J_G0017333	Dazap1	78	46.032
MGP_DBA2J_G0035350	Rbm3	100	63.529	MGP_DBA2J_G0017327	Cirbp	99	60.588
MGP_DBA2J_G0035350	Rbm3	82	38.710	MGP_DBA2J_G0028258	Elavl2	63	32.911
MGP_DBA2J_G0035350	Rbm3	82	43.243	MGP_DBA2J_G0018758	Msi2	61	42.857
MGP_DBA2J_G0035350	Rbm3	90	35.385	MGP_DBA2J_G0027016	Pabpc4l	83	34.286
MGP_DBA2J_G0035350	Rbm3	87	40.000	MGP_DBA2J_G0028550	Pabpc4	68	37.500
MGP_DBA2J_G0035350	Rbm3	99	35.955	MGP_DBA2J_G0030794	Tia1	70	41.333