EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0035552 (Gene tree)
Gene ID: -
Gene Symbol: Zic3
Alias: Bn|Ka
Full Name: zinc finger protein of the cerebellum 3
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 18907 bases
Position: chrX:53121403-53140309
Accession: 106676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0095891	zf-C2H2	PF00096.26	8.5e-23	1	4
MGP_DBA2J_P0095891	zf-C2H2	PF00096.26	8.5e-23	2	4
MGP_DBA2J_P0095891	zf-C2H2	PF00096.26	8.5e-23	3	4
MGP_DBA2J_P0095891	zf-C2H2	PF00096.26	8.5e-23	4	4
MGP_DBA2J_P0095890	zf-C2H2	PF00096.26	3.4e-21	1	4
MGP_DBA2J_P0095890	zf-C2H2	PF00096.26	3.4e-21	2	4
MGP_DBA2J_P0095890	zf-C2H2	PF00096.26	3.4e-21	3	4
MGP_DBA2J_P0095890	zf-C2H2	PF00096.26	3.4e-21	4	4
MGP_DBA2J_P0095892	zf-C2H2	PF00096.26	2.1e-20	1	4
MGP_DBA2J_P0095892	zf-C2H2	PF00096.26	2.1e-20	2	4
MGP_DBA2J_P0095892	zf-C2H2	PF00096.26	2.1e-20	3	4
MGP_DBA2J_P0095892	zf-C2H2	PF00096.26	2.1e-20	4	4
MGP_DBA2J_P0095891	zf-met	PF12874.7	7.9e-05	1	1
MGP_DBA2J_P0095892	zf-met	PF12874.7	0.00077	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0095892	-	1950	-	MGP_DBA2J_P0095892	456 (aa)	-	-
MGP_DBA2J_T0095889	-	566	XM_006527973	MGP_DBA2J_P0095889	89 (aa)	XP_006528036	Q62521
MGP_DBA2J_T0095890	-	3949	-	MGP_DBA2J_P0095890	466 (aa)	-	-
MGP_DBA2J_T0095891	-	2983	-	MGP_DBA2J_P0095891	246 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0035552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0035552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0035552	Zic3	64	38.849	MGP_DBA2J_G0022381	Snai2	50	38.776
MGP_DBA2J_G0035552	Zic3	64	33.540	MGP_DBA2J_G0026763	Zfp64	56	33.540