EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0035887 (Gene tree)
Gene ID: -
Gene Symbol: Nxf2
Alias: 4930455N06Rik|NXF2|Nxf-b
Full Name: nuclear RNA export factor 2
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 20777 bases
Position: chrX:130874167-130894943
Accession: 1933192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0097119	Tap-RNA_bind	PF09162.10	1.8e-37	1	1
MGP_DBA2J_P0097117	Tap-RNA_bind	PF09162.10	1.8e-37	1	1
MGP_DBA2J_P0097118	Tap-RNA_bind	PF09162.10	1.9e-37	1	1
MGP_DBA2J_P0097119	TAP_C	PF03943.13	4.5e-22	1	1
MGP_DBA2J_P0097117	TAP_C	PF03943.13	4.6e-22	1	1
MGP_DBA2J_P0097118	TAP_C	PF03943.13	4.7e-22	1	1
MGP_DBA2J_P0097119	NTF2	PF02136.20	6.2e-10	1	1
MGP_DBA2J_P0097117	NTF2	PF02136.20	6.5e-10	1	1
MGP_DBA2J_P0097118	NTF2	PF02136.20	4.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0097117	-	2375	-	MGP_DBA2J_P0097117	685 (aa)	-	-
MGP_DBA2J_T0097116	-	1814	-	-	- (aa)	-	-
MGP_DBA2J_T0097119	-	2316	-	MGP_DBA2J_P0097119	671 (aa)	-	-
MGP_DBA2J_T0097118	-	2393	-	MGP_DBA2J_P0097118	691 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0035887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0035887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0035887	Nxf2	90	36.139	MGP_DBA2J_G0035903	Nxf3	89	48.188
MGP_DBA2J_G0035887	Nxf2	86	53.358	MGP_DBA2J_G0035893	Nxf7	87	53.358
MGP_DBA2J_G0035887	Nxf2	82	54.887	MGP_DBA2J_G0024642	Nxf1	98	56.504