EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0016144 (Gene tree)
Gene ID: -
Gene Symbol: Lrrfip1
Alias: AU024550|FLAP (FLI LRR associated protein)|Flap|Fliiap1
Full Name: leucine rich repeat (in FLII) interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 136483 bases
Position: chr1:87446602-87583084
Accession: 1342770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0021111	LRRFIP	PF09738.9	7.8e-106	1	1
MGP_FVBNJ_P0021116	LRRFIP	PF09738.9	1.5e-90	1	2
MGP_FVBNJ_P0021116	LRRFIP	PF09738.9	1.5e-90	2	2
MGP_FVBNJ_P0021112	LRRFIP	PF09738.9	7.7e-90	1	3
MGP_FVBNJ_P0021112	LRRFIP	PF09738.9	7.7e-90	2	3
MGP_FVBNJ_P0021112	LRRFIP	PF09738.9	7.7e-90	3	3
MGP_FVBNJ_P0021115	LRRFIP	PF09738.9	8.5e-90	1	3
MGP_FVBNJ_P0021115	LRRFIP	PF09738.9	8.5e-90	2	3
MGP_FVBNJ_P0021115	LRRFIP	PF09738.9	8.5e-90	3	3
MGP_FVBNJ_P0021113	LRRFIP	PF09738.9	1e-84	1	1
MGP_FVBNJ_P0021110	LRRFIP	PF09738.9	2.2e-82	1	2
MGP_FVBNJ_P0021110	LRRFIP	PF09738.9	2.2e-82	2	2
MGP_FVBNJ_P0021109	LRRFIP	PF09738.9	6.8e-66	1	2
MGP_FVBNJ_P0021109	LRRFIP	PF09738.9	6.8e-66	2	2
MGP_FVBNJ_P0021114	LRRFIP	PF09738.9	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0021109	-	1031	XM_006529175	MGP_FVBNJ_P0021109	323 (aa)	XP_006529238	Q3UZ39
MGP_FVBNJ_T0021119	-	483	-	-	- (aa)	-	-
MGP_FVBNJ_T0021118	-	215	-	-	- (aa)	-	-
MGP_FVBNJ_T0021117	-	2650	-	-	- (aa)	-	-
MGP_FVBNJ_T0021116	-	2150	-	MGP_FVBNJ_P0021116	663 (aa)	-	-
MGP_FVBNJ_T0021115	-	2755	-	MGP_FVBNJ_P0021115	628 (aa)	-	-
MGP_FVBNJ_T0021114	-	442	-	MGP_FVBNJ_P0021114	98 (aa)	-	-
MGP_FVBNJ_T0021113	-	3634	-	MGP_FVBNJ_P0021113	729 (aa)	-	-
MGP_FVBNJ_T0021112	-	2879	-	MGP_FVBNJ_P0021112	638 (aa)	-	-
MGP_FVBNJ_T0021111	-	2050	-	MGP_FVBNJ_P0021111	428 (aa)	-	-
MGP_FVBNJ_T0021110	-	1747	-	MGP_FVBNJ_P0021110	575 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0016144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0016144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0016144	Lrrfip1	99	60.890	MGP_FVBNJ_G0035127	Lrrfip2	100	67.630