EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0016187 (Gene tree)
Gene ID: -
Gene Symbol: Sept2
Alias: AW208991|Nedd-5|Nedd5|mKIAA0158
Full Name: septin 2
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 30774 bases
Position: chr1:89969264-90000037
Accession: 97298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0021309	MMR_HSR1	PF01926.23	9.6e-08	1	1
MGP_FVBNJ_P0021314	MMR_HSR1	PF01926.23	9.7e-08	1	1
MGP_FVBNJ_P0021315	MMR_HSR1	PF01926.23	1e-07	1	1
MGP_FVBNJ_P0021318	MMR_HSR1	PF01926.23	1e-07	1	1
MGP_FVBNJ_P0021308	MMR_HSR1	PF01926.23	1.3e-07	1	1
MGP_FVBNJ_P0021316	MMR_HSR1	PF01926.23	1.4e-07	1	1
MGP_FVBNJ_P0021317	MMR_HSR1	PF01926.23	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0021319	-	466	-	-	- (aa)	-	-
MGP_FVBNJ_T0021318	-	779	-	MGP_FVBNJ_P0021318	221 (aa)	-	-
MGP_FVBNJ_T0021308	-	512	XM_006529240	MGP_FVBNJ_P0021308	107 (aa)	XP_006529303	P42208
MGP_FVBNJ_T0021309	-	730	-	MGP_FVBNJ_P0021309	212 (aa)	-	-
MGP_FVBNJ_T0021311	-	696	-	-	- (aa)	-	-
MGP_FVBNJ_T0021310	-	2528	-	MGP_FVBNJ_P0021310	361 (aa)	-	-
MGP_FVBNJ_T0021313	-	3328	-	-	- (aa)	-	-
MGP_FVBNJ_T0021312	-	424	-	MGP_FVBNJ_P0021312	77 (aa)	-	-
MGP_FVBNJ_T0021315	-	756	-	MGP_FVBNJ_P0021315	221 (aa)	-	-
MGP_FVBNJ_T0021314	-	784	-	MGP_FVBNJ_P0021314	213 (aa)	-	-
MGP_FVBNJ_T0021317	-	552	-	MGP_FVBNJ_P0021317	177 (aa)	-	-
MGP_FVBNJ_T0021316	-	477	-	MGP_FVBNJ_P0021316	120 (aa)	-	-
MGP_FVBNJ_T0021320	-	418	-	MGP_FVBNJ_P0021320	44 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0016187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0016187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0016187	Sept2	100	41.284	MGP_FVBNJ_G0035383	Sept6	69	43.234
MGP_FVBNJ_G0016187	Sept2	100	48.148	MGP_FVBNJ_G0022288	Sept12	81	43.077
MGP_FVBNJ_G0016187	Sept2	100	65.421	MGP_FVBNJ_G0018728	Sept4	97	66.230
MGP_FVBNJ_G0016187	Sept2	100	64.486	MGP_FVBNJ_G0022425	Sept5	92	60.059
MGP_FVBNJ_G0016187	Sept2	100	41.228	MGP_FVBNJ_G0017085	Sept10	67	43.144
MGP_FVBNJ_G0016187	Sept2	100	41.818	MGP_FVBNJ_G0018126	Sept8	70	42.812
MGP_FVBNJ_G0016187	Sept2	100	50.000	MGP_FVBNJ_G0021947	Sept3	89	49.007
MGP_FVBNJ_G0016187	Sept2	100	42.202	MGP_FVBNJ_G0029530	Sept11	69	43.234
MGP_FVBNJ_G0016187	Sept2	100	49.778	MGP_FVBNJ_G0019270	Sept9	88	49.767
MGP_FVBNJ_G0016187	Sept2	100	62.037	MGP_FVBNJ_G0034252	Sept7	65	62.887
MGP_FVBNJ_G0016187	Sept2	100	60.748	MGP_FVBNJ_G0032802	Sept1	100	64.828