EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0016399 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb41
Alias: 8430415N23Rik|9430031N01|9830132G07Rik|AI316857
Full Name: zinc finger and BTB domain containing 41
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 30719 bases
Position: chr1:135551491-135582209
Accession: 2444487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0022289	zf-C2H2	PF00096.26	1.6e-43	1	8
MGP_FVBNJ_P0022289	zf-C2H2	PF00096.26	1.6e-43	2	8
MGP_FVBNJ_P0022289	zf-C2H2	PF00096.26	1.6e-43	3	8
MGP_FVBNJ_P0022289	zf-C2H2	PF00096.26	1.6e-43	4	8
MGP_FVBNJ_P0022289	zf-C2H2	PF00096.26	1.6e-43	5	8
MGP_FVBNJ_P0022289	zf-C2H2	PF00096.26	1.6e-43	6	8
MGP_FVBNJ_P0022289	zf-C2H2	PF00096.26	1.6e-43	7	8
MGP_FVBNJ_P0022289	zf-C2H2	PF00096.26	1.6e-43	8	8
MGP_FVBNJ_P0022288	zf-C2H2	PF00096.26	5.9e-36	1	6
MGP_FVBNJ_P0022288	zf-C2H2	PF00096.26	5.9e-36	2	6
MGP_FVBNJ_P0022288	zf-C2H2	PF00096.26	5.9e-36	3	6
MGP_FVBNJ_P0022288	zf-C2H2	PF00096.26	5.9e-36	4	6
MGP_FVBNJ_P0022288	zf-C2H2	PF00096.26	5.9e-36	5	6
MGP_FVBNJ_P0022288	zf-C2H2	PF00096.26	5.9e-36	6	6
MGP_FVBNJ_P0022289	zf-met	PF12874.7	2.3e-07	1	2
MGP_FVBNJ_P0022289	zf-met	PF12874.7	2.3e-07	2	2
MGP_FVBNJ_P0022288	zf-met	PF12874.7	0.00042	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0022290	-	3803	-	MGP_FVBNJ_P0022290	218 (aa)	-	-
MGP_FVBNJ_T0022288	-	2127	XM_006529446	MGP_FVBNJ_P0022288	657 (aa)	XP_006529509	Q811F1
MGP_FVBNJ_T0022289	-	8361	-	MGP_FVBNJ_P0022289	908 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0016399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0016399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0016399	Zbtb41	58	33.910	MGP_FVBNJ_G0033529	Zfp882	76	33.910
MGP_FVBNJ_G0016399	Zbtb41	53	30.719	MGP_FVBNJ_G0020511	Zfp759	88	32.703
MGP_FVBNJ_G0016399	Zbtb41	53	32.797	MGP_FVBNJ_G0023058	Zscan10	76	32.797
MGP_FVBNJ_G0016399	Zbtb41	68	33.333	MGP_FVBNJ_G0023028	Zfp677	80	37.017
MGP_FVBNJ_G0016399	Zbtb41	89	30.769	MGP_FVBNJ_G0020786	Zfp131	70	30.061
MGP_FVBNJ_G0016399	Zbtb41	52	36.393	MGP_FVBNJ_G0031595	Zfp111	72	36.620
MGP_FVBNJ_G0016399	Zbtb41	71	41.279	MGP_FVBNJ_G0029280	Zbtb49	62	47.887
MGP_FVBNJ_G0016399	Zbtb41	54	34.286	MGP_FVBNJ_G0026407	Gzf1	84	34.286
MGP_FVBNJ_G0016399	Zbtb41	76	34.274	MGP_FVBNJ_G0017006	Zbtb24	72	34.274
MGP_FVBNJ_G0016399	Zbtb41	61	37.379	MGP_FVBNJ_G0031600	Zfp94	82	37.379
MGP_FVBNJ_G0016399	Zbtb41	64	39.326	MGP_FVBNJ_G0026916	Mynn	61	39.326
MGP_FVBNJ_G0016399	Zbtb41	58	41.844	MGP_FVBNJ_G0030950	Zfp637	72	41.844
MGP_FVBNJ_G0016399	Zbtb41	59	34.343	MGP_FVBNJ_G0026691	Zfp334	68	41.026
MGP_FVBNJ_G0016399	Zbtb41	61	38.824	MGP_FVBNJ_G0024402	Zfp236	61	36.782
MGP_FVBNJ_G0016399	Zbtb41	63	32.759	MGP_FVBNJ_G0035206	Zfp651	66	33.071
MGP_FVBNJ_G0016399	Zbtb41	55	34.167	MGP_FVBNJ_G0031348	Zfp865	79	41.071