EuRBPDB

Description

Ensembl ID: MGP_FVBNJ_G0016442 (Gene tree)
Gene ID: -
Gene Symbol: Dhx9
Alias: AI326842|Ddx9|HEL-5|NDH II|NDHII|RHA|RNA helicase|leukophysin|mHEL-5|nuclear DNA helicase II
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 9
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 31967 bases
Position: chr1:149388588-149420554
Accession: 108177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0022504	dsrm	PF00035.26	9.8e-27	1	2
MGP_FVBNJ_P0022504	dsrm	PF00035.26	9.8e-27	2	2
MGP_FVBNJ_P0022501	dsrm	PF00035.26	3.6e-26	1	2
MGP_FVBNJ_P0022501	dsrm	PF00035.26	3.6e-26	2	2
MGP_FVBNJ_P0022500	dsrm	PF00035.26	3.7e-26	1	2
MGP_FVBNJ_P0022500	dsrm	PF00035.26	3.7e-26	2	2
MGP_FVBNJ_P0022504	DEAD	PF00270.29	2.4e-06	1	1
MGP_FVBNJ_P0022500	DEAD	PF00270.29	7.7e-06	1	1
MGP_FVBNJ_P0022501	DEAD	PF00270.29	7.7e-06	1	1
MGP_FVBNJ_P0022500	HA2	PF04408.23	1.2e-14	1	1
MGP_FVBNJ_P0022501	HA2	PF04408.23	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0022501	-	4615	-	MGP_FVBNJ_P0022501	1384 (aa)	-	-
MGP_FVBNJ_T0022500	-	4560	XM_011247918	MGP_FVBNJ_P0022500	1383 (aa)	XP_011246220	A0A087WPL5
MGP_FVBNJ_T0022503	-	2018	-	MGP_FVBNJ_P0022503	46 (aa)	-	-
MGP_FVBNJ_T0022502	-	2406	-	MGP_FVBNJ_P0022502	459 (aa)	-	-
MGP_FVBNJ_T0022505	-	658	-	-	- (aa)	-	-
MGP_FVBNJ_T0022504	-	2346	-	MGP_FVBNJ_P0022504	735 (aa)	-	-
MGP_FVBNJ_T0022507	-	2256	-	-	- (aa)	-	-
MGP_FVBNJ_T0022506	-	2660	-	-	- (aa)	-	-
MGP_FVBNJ_T0022508	-	1602	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0016442	Dhx9	56	47.685	MGP_FVBNJ_G0024201	Ythdc2	90	35.912
MGP_FVBNJ_G0016442	Dhx9	53	38.034	MGP_FVBNJ_G0027053	Dhx36	76	37.613
MGP_FVBNJ_G0016442	Dhx9	54	32.518	MGP_FVBNJ_G0026600	Dhx35	52	31.051
MGP_FVBNJ_G0016442	Dhx9	54	35.915	MGP_FVBNJ_G0023852	Dhx57	63	35.681
MGP_FVBNJ_G0016442	Dhx9	58	32.593	MGP_FVBNJ_G0020750	Dhx29	62	32.047
MGP_FVBNJ_G0016442	Dhx9	52	40.153	MGP_FVBNJ_G0035098	Dhx30	62	32.861