EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0017135 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 33613 bases
Position: chr10:58698537-58732149
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0025259	GUCT	PF08152.12	4.7e-28	1	1
MGP_FVBNJ_P0025259	ResIII	PF04851.15	5.8e-10	1	1
MGP_FVBNJ_P0025259	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0025258	-	2627	XM_006514345	MGP_FVBNJ_P0025258	669 (aa)	XP_006514408	Q99MJ9
MGP_FVBNJ_T0025259	-	2527	-	MGP_FVBNJ_P0025259	734 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0017135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0017135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0017135	Ddx50	61	34.272	MGP_FVBNJ_G0026705	Ddx27	52	34.129
MGP_FVBNJ_G0017135	Ddx50	90	66.446	MGP_FVBNJ_G0017134	Ddx21	78	63.365
MGP_FVBNJ_G0017135	Ddx50	54	33.962	MGP_FVBNJ_G0021887	Ddx17	55	33.962
MGP_FVBNJ_G0017135	Ddx50	53	32.603	MGP_FVBNJ_G0020413	Ddx41	57	32.603
MGP_FVBNJ_G0017135	Ddx50	55	30.653	MGP_FVBNJ_G0019302	Eif4a3	87	30.653
MGP_FVBNJ_G0017135	Ddx50	53	33.799	MGP_FVBNJ_G0034823	Ddx43	54	33.799
MGP_FVBNJ_G0017135	Ddx50	55	31.267	MGP_FVBNJ_G0022488	Eif4a2	90	30.904
MGP_FVBNJ_G0017135	Ddx50	54	31.383	MGP_FVBNJ_G0035327	Ddx3x	52	33.239
MGP_FVBNJ_G0017135	Ddx50	54	31.383	MGP_FVBNJ_G0016758	D1Pas1	56	32.181
MGP_FVBNJ_G0017135	Ddx50	51	34.302	MGP_FVBNJ_G0019136	Ddx5	70	33.446
MGP_FVBNJ_G0017135	Ddx50	61	30.676	MGP_FVBNJ_G0031183	Ddx47	94	30.175