EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0017181 (Gene tree)
Gene ID: -
Gene Symbol: Rab36
Alias: 6330593L16Rik|AW047545
Full Name: RAB36%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 19919 bases
Position: chr10:71046599-71066517
Accession: 1924127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0025520	MMR_HSR1	PF01926.23	8.6e-06	1	1
MGP_FVBNJ_P0025521	MMR_HSR1	PF01926.23	8.6e-06	1	1
MGP_FVBNJ_P0025525	MMR_HSR1	PF01926.23	8.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0025519	-	952	-	-	- (aa)	-	-
MGP_FVBNJ_T0025526	-	772	-	-	- (aa)	-	-
MGP_FVBNJ_T0025524	-	576	-	MGP_FVBNJ_P0025524	134 (aa)	-	-
MGP_FVBNJ_T0025525	-	2952	-	MGP_FVBNJ_P0025525	267 (aa)	-	-
MGP_FVBNJ_T0025522	-	2994	-	-	- (aa)	-	-
MGP_FVBNJ_T0025523	-	433	-	-	- (aa)	-	-
MGP_FVBNJ_T0025520	-	3291	-	MGP_FVBNJ_P0025520	267 (aa)	-	-
MGP_FVBNJ_T0025521	-	2641	-	MGP_FVBNJ_P0025521	267 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0017181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0017181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0017181	Rab36	60	33.750	MGP_FVBNJ_G0023927	Rab18	56	38.793
MGP_FVBNJ_G0017181	Rab36	79	34.123	MGP_FVBNJ_G0023335	Rab11b	94	34.123
MGP_FVBNJ_G0017181	Rab36	61	38.272	MGP_FVBNJ_G0032289	Rab30	78	38.272
MGP_FVBNJ_G0017181	Rab36	79	33.649	MGP_FVBNJ_G0024493	Rab1b	97	33.649
MGP_FVBNJ_G0017181	Rab36	61	34.132	MGP_FVBNJ_G0026992	Rab33b	54	37.903
MGP_FVBNJ_G0017181	Rab36	58	33.758	MGP_FVBNJ_G0031358	Rasl2-9	70	33.758
MGP_FVBNJ_G0017181	Rab36	61	37.654	MGP_FVBNJ_G0021106	Rab2b	79	38.710
MGP_FVBNJ_G0017181	Rab36	62	32.121	MGP_FVBNJ_G0026758	Rab22a	84	32.121
MGP_FVBNJ_G0017181	Rab36	63	37.500	MGP_FVBNJ_G0027821	Rab2a	78	37.500
MGP_FVBNJ_G0017181	Rab36	64	37.427	MGP_FVBNJ_G0025457	Rab14	77	40.171
MGP_FVBNJ_G0017181	Rab36	62	34.940	MGP_FVBNJ_G0035613	Rab39b	77	34.940
MGP_FVBNJ_G0017181	Rab36	60	35.625	MGP_FVBNJ_G0018989	Rab5c	73	35.625
MGP_FVBNJ_G0017181	Rab36	79	35.780	MGP_FVBNJ_G0034698	Rab11a	94	35.780
MGP_FVBNJ_G0017181	Rab36	59	32.716	MGP_FVBNJ_G0036009	Rab9	79	31.677
MGP_FVBNJ_G0017181	Rab36	83	58.559	MGP_FVBNJ_G0018590	Rab34	86	58.559
MGP_FVBNJ_G0017181	Rab36	80	36.150	MGP_FVBNJ_G0032349	Rab6a	94	36.150
MGP_FVBNJ_G0017181	Rab36	80	36.620	MGP_FVBNJ_G0034954	Rab6b	94	36.620
MGP_FVBNJ_G0017181	Rab36	68	38.122	MGP_FVBNJ_G0027195	Rab25	54	43.590
MGP_FVBNJ_G0017181	Rab36	67	32.447	MGP_FVBNJ_G0035444	Rab33a	51	36.885
MGP_FVBNJ_G0017181	Rab36	61	36.196	MGP_FVBNJ_G0019195	Rab37	74	36.196
MGP_FVBNJ_G0017181	Rab36	55	30.201	MGP_FVBNJ_G0032988	Hras	83	30.625
MGP_FVBNJ_G0017181	Rab36	74	32.161	MGP_FVBNJ_G0019682	Rab15	92	32.161
MGP_FVBNJ_G0017181	Rab36	79	33.175	MGP_FVBNJ_G0017895	Rab1a	95	33.175
MGP_FVBNJ_G0017181	Rab36	77	30.244	MGP_FVBNJ_G0023683	Rab5a	91	30.244
MGP_FVBNJ_G0017181	Rab36	65	35.955	MGP_FVBNJ_G0035852	Rab9b	50	42.000
MGP_FVBNJ_G0017181	Rab36	60	35.000	MGP_FVBNJ_G0017710	Rab5b	73	35.000