EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0017710 (Gene tree)
Gene ID: -
Gene Symbol: Rab5b
Alias: C030027M18Rik
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 15561 bases
Position: chr10:125102011-125117571
Accession: 105938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0027329	MMR_HSR1	PF01926.23	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0027329	-	648	XM_006513384	MGP_FVBNJ_P0027329	215 (aa)	XP_006513447	P61021

Gene Model

Click here to download MGP_FVBNJ_G0017710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0017710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0017710	Rab5b	86	40.761	MGP_FVBNJ_G0021106	Rab2b	85	40.761
MGP_FVBNJ_G0017710	Rab5b	73	35.000	MGP_FVBNJ_G0017181	Rab36	60	35.000
MGP_FVBNJ_G0017710	Rab5b	77	32.335	MGP_FVBNJ_G0031251	Kras	88	32.335
MGP_FVBNJ_G0017710	Rab5b	55	30.159	MGP_FVBNJ_G0019521	Arl4a	60	30.159
MGP_FVBNJ_G0017710	Rab5b	62	30.986	MGP_FVBNJ_G0016364	Arl8a	73	30.986
MGP_FVBNJ_G0017710	Rab5b	91	47.959	MGP_FVBNJ_G0023772	Rab31	98	47.959
MGP_FVBNJ_G0017710	Rab5b	62	30.986	MGP_FVBNJ_G0030875	Arl8b	73	30.986
MGP_FVBNJ_G0017710	Rab5b	82	45.198	MGP_FVBNJ_G0024493	Rab1b	87	45.198
MGP_FVBNJ_G0017710	Rab5b	94	41.827	MGP_FVBNJ_G0019195	Rab37	93	41.827
MGP_FVBNJ_G0017710	Rab5b	83	37.705	MGP_FVBNJ_G0035444	Rab33a	77	37.705
MGP_FVBNJ_G0017710	Rab5b	93	35.294	MGP_FVBNJ_G0036009	Rab9	99	35.294
MGP_FVBNJ_G0017710	Rab5b	74	37.195	MGP_FVBNJ_G0022049	Rabl2	72	37.195
MGP_FVBNJ_G0017710	Rab5b	77	45.783	MGP_FVBNJ_G0034954	Rab6b	80	45.783
MGP_FVBNJ_G0017710	Rab5b	82	36.932	MGP_FVBNJ_G0019682	Rab15	83	36.932
MGP_FVBNJ_G0017710	Rab5b	82	32.787	MGP_FVBNJ_G0032988	Hras	96	32.787
MGP_FVBNJ_G0017710	Rab5b	75	45.963	MGP_FVBNJ_G0027195	Rab25	76	45.963
MGP_FVBNJ_G0017710	Rab5b	100	81.860	MGP_FVBNJ_G0023683	Rab5a	100	81.860
MGP_FVBNJ_G0017710	Rab5b	97	86.124	MGP_FVBNJ_G0018989	Rab5c	97	86.124
MGP_FVBNJ_G0017710	Rab5b	90	43.627	MGP_FVBNJ_G0023335	Rab11b	89	48.872
MGP_FVBNJ_G0017710	Rab5b	82	39.344	MGP_FVBNJ_G0026992	Rab33b	79	39.130
MGP_FVBNJ_G0017710	Rab5b	78	35.882	MGP_FVBNJ_G0035613	Rab39b	80	35.882
MGP_FVBNJ_G0017710	Rab5b	75	44.720	MGP_FVBNJ_G0025457	Rab14	89	41.481
MGP_FVBNJ_G0017710	Rab5b	80	33.333	MGP_FVBNJ_G0031358	Rasl2-9	76	33.333
MGP_FVBNJ_G0017710	Rab5b	90	35.323	MGP_FVBNJ_G0035852	Rab9b	97	35.323
MGP_FVBNJ_G0017710	Rab5b	85	35.326	MGP_FVBNJ_G0023781	Rab12	63	35.326
MGP_FVBNJ_G0017710	Rab5b	91	37.949	MGP_FVBNJ_G0027821	Rab2a	76	43.478
MGP_FVBNJ_G0017710	Rab5b	84	30.220	MGP_FVBNJ_G0027476	Nras	99	33.333
MGP_FVBNJ_G0017710	Rab5b	90	38.462	MGP_FVBNJ_G0023927	Rab18	93	38.462
MGP_FVBNJ_G0017710	Rab5b	90	43.367	MGP_FVBNJ_G0017895	Rab1a	95	43.367
MGP_FVBNJ_G0017710	Rab5b	77	45.181	MGP_FVBNJ_G0032349	Rab6a	80	45.181
MGP_FVBNJ_G0017710	Rab5b	75	47.205	MGP_FVBNJ_G0034698	Rab11a	88	48.889
MGP_FVBNJ_G0017710	Rab5b	78	42.857	MGP_FVBNJ_G0032289	Rab30	83	42.857
MGP_FVBNJ_G0017710	Rab5b	82	33.333	MGP_FVBNJ_G0029129	Rheb	93	33.333
MGP_FVBNJ_G0017710	Rab5b	90	47.938	MGP_FVBNJ_G0026758	Rab22a	98	47.938