EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0017895 (Gene tree)
Gene ID: -
Gene Symbol: Rab1a
Alias: ECO:0000313|MGI:MGI:97842},GN Rab1A|Gtbp|Rab-1|Rab1|Rab1 {ECO:0000313|EMBL:EDL07829.1,GN ECO:0000313|Ensembl:ENSMUSP00000127330|Ypt1|mKIAA3012|ras-related YPT1 protein
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 25140 bases
Position: chr11:16806109-16831248
Accession: 97842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0027956	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0027955	-	702	-	-	- (aa)	-	-
MGP_FVBNJ_T0027954	-	962	-	-	- (aa)	-	-
MGP_FVBNJ_T0027956	-	2533	-	MGP_FVBNJ_P0027956	205 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0017895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0017895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0017895	Rab1a	76	38.994	MGP_FVBNJ_G0035852	Rab9b	79	38.994
MGP_FVBNJ_G0017895	Rab1a	62	31.061	MGP_FVBNJ_G0027090	Arl14	65	31.061
MGP_FVBNJ_G0017895	Rab1a	82	32.544	MGP_FVBNJ_G0029129	Rheb	91	32.544
MGP_FVBNJ_G0017895	Rab1a	80	38.415	MGP_FVBNJ_G0027476	Nras	96	39.041
MGP_FVBNJ_G0017895	Rab1a	90	39.785	MGP_FVBNJ_G0023772	Rab31	95	39.785
MGP_FVBNJ_G0017895	Rab1a	83	43.429	MGP_FVBNJ_G0026992	Rab33b	76	43.429
MGP_FVBNJ_G0017895	Rab1a	95	43.814	MGP_FVBNJ_G0023683	Rab5a	90	43.814
MGP_FVBNJ_G0017895	Rab1a	94	36.410	MGP_FVBNJ_G0034954	Rab6b	94	36.410
MGP_FVBNJ_G0017895	Rab1a	57	32.203	MGP_FVBNJ_G0030875	Arl8b	61	32.203
MGP_FVBNJ_G0017895	Rab1a	76	38.994	MGP_FVBNJ_G0036009	Rab9	79	38.994
MGP_FVBNJ_G0017895	Rab1a	99	44.554	MGP_FVBNJ_G0025457	Rab14	97	47.619
MGP_FVBNJ_G0017895	Rab1a	57	33.058	MGP_FVBNJ_G0024550	Arl2	61	33.058
MGP_FVBNJ_G0017895	Rab1a	94	43.434	MGP_FVBNJ_G0035444	Rab33a	83	43.434
MGP_FVBNJ_G0017895	Rab1a	90	48.108	MGP_FVBNJ_G0027821	Rab2a	99	45.238
MGP_FVBNJ_G0017895	Rab1a	95	33.175	MGP_FVBNJ_G0017181	Rab36	79	33.175
MGP_FVBNJ_G0017895	Rab1a	58	34.454	MGP_FVBNJ_G0016364	Arl8a	62	34.454
MGP_FVBNJ_G0017895	Rab1a	57	31.092	MGP_FVBNJ_G0016132	Arl4c	61	31.092
MGP_FVBNJ_G0017895	Rab1a	80	50.303	MGP_FVBNJ_G0019682	Rab15	78	50.303
MGP_FVBNJ_G0017895	Rab1a	86	43.820	MGP_FVBNJ_G0035613	Rab39b	84	43.820
MGP_FVBNJ_G0017895	Rab1a	57	31.933	MGP_FVBNJ_G0019521	Arl4a	59	31.933
MGP_FVBNJ_G0017895	Rab1a	95	43.367	MGP_FVBNJ_G0017710	Rab5b	90	43.367
MGP_FVBNJ_G0017895	Rab1a	94	45.361	MGP_FVBNJ_G0023927	Rab18	93	45.361
MGP_FVBNJ_G0017895	Rab1a	80	36.527	MGP_FVBNJ_G0034931	Mras	80	36.527
MGP_FVBNJ_G0017895	Rab1a	94	38.384	MGP_FVBNJ_G0032349	Rab6a	94	38.384
MGP_FVBNJ_G0017895	Rab1a	82	45.833	MGP_FVBNJ_G0027195	Rab25	79	45.833
MGP_FVBNJ_G0017895	Rab1a	82	50.296	MGP_FVBNJ_G0023781	Rab12	58	50.296
MGP_FVBNJ_G0017895	Rab1a	80	38.415	MGP_FVBNJ_G0031251	Kras	97	35.676
MGP_FVBNJ_G0017895	Rab1a	69	30.201	MGP_FVBNJ_G0019032	Arl4d	73	30.201
MGP_FVBNJ_G0017895	Rab1a	84	35.028	MGP_FVBNJ_G0032988	Hras	93	35.028
MGP_FVBNJ_G0017895	Rab1a	79	31.902	MGP_FVBNJ_G0031358	Rasl2-9	73	31.902
MGP_FVBNJ_G0017895	Rab1a	99	92.079	MGP_FVBNJ_G0024493	Rab1b	100	92.079
MGP_FVBNJ_G0017895	Rab1a	81	50.602	MGP_FVBNJ_G0032289	Rab30	82	50.602
MGP_FVBNJ_G0017895	Rab1a	77	40.491	MGP_FVBNJ_G0018590	Rab34	62	40.491
MGP_FVBNJ_G0017895	Rab1a	81	45.238	MGP_FVBNJ_G0019195	Rab37	78	45.238
MGP_FVBNJ_G0017895	Rab1a	100	45.581	MGP_FVBNJ_G0023335	Rab11b	98	53.425
MGP_FVBNJ_G0017895	Rab1a	85	52.299	MGP_FVBNJ_G0034698	Rab11a	100	50.000
MGP_FVBNJ_G0017895	Rab1a	68	30.496	MGP_FVBNJ_G0025015	Arl3	72	30.496
MGP_FVBNJ_G0017895	Rab1a	75	37.580	MGP_FVBNJ_G0022049	Rabl2	67	37.580
MGP_FVBNJ_G0017895	Rab1a	95	38.660	MGP_FVBNJ_G0026758	Rab22a	97	38.660
MGP_FVBNJ_G0017895	Rab1a	97	46.465	MGP_FVBNJ_G0021106	Rab2b	92	46.465
MGP_FVBNJ_G0017895	Rab1a	95	43.590	MGP_FVBNJ_G0018989	Rab5c	89	43.590