EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0018037 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 9629 bases
Position: chr11:45433611-45443239
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0028519	MMR_HSR1	PF01926.23	5.6e-05	1	1
MGP_FVBNJ_P0028518	MMR_HSR1	PF01926.23	9.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0028518	-	2259	-	MGP_FVBNJ_P0028518	409 (aa)	-	-
MGP_FVBNJ_T0028519	-	1213	-	MGP_FVBNJ_P0028519	288 (aa)	-	-
MGP_FVBNJ_T0028517	-	3832	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0018037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0018037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0018037	Irgm1	79	36.864	MGP_FVBNJ_G0024258	Gm4951	77	33.013
MGP_FVBNJ_G0018037	Irgm1	75	33.028	MGP_FVBNJ_G0024259	F830016B08Rik	78	33.028
MGP_FVBNJ_G0018037	Irgm1	76	35.169	MGP_FVBNJ_G0031605	Irgc1	71	30.183
MGP_FVBNJ_G0018037	Irgm1	89	56.031	MGP_FVBNJ_G0018172	Igtp	90	49.740
MGP_FVBNJ_G0018037	Irgm1	83	62.185	MGP_FVBNJ_G0018173	Irgm2	92	50.135
MGP_FVBNJ_G0018037	Irgm1	93	33.696	MGP_FVBNJ_G0024260	Iigp1	79	32.515
MGP_FVBNJ_G0018037	Irgm1	82	38.934	MGP_FVBNJ_G0018044	-	72	36.545
MGP_FVBNJ_G0018037	Irgm1	82	38.934	MGP_FVBNJ_G0018043	-	72	36.545
MGP_FVBNJ_G0018037	Irgm1	89	31.937	MGP_FVBNJ_G0018045	Ifi47	91	31.937