EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0018082 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 14913 bases
Position: chr11:47579823-47594735
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	1	11
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	2	11
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	3	11
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	4	11
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	5	11
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	6	11
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	7	11
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	8	11
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	9	11
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	10	11
MGP_FVBNJ_P0028677	zf-C2H2	PF00096.26	7.7e-63	11	11
MGP_FVBNJ_P0028677	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0028680	-	606	-	-	- (aa)	-	-
MGP_FVBNJ_T0028677	-	2114	XM_006533208	MGP_FVBNJ_P0028677	536 (aa)	XP_006533271	Q5NCH5
MGP_FVBNJ_T0028679	-	722	-	MGP_FVBNJ_P0028679	122 (aa)	-	-
MGP_FVBNJ_T0028678	-	579	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0018082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0018082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0018082	Zfp454	69	60.345	MGP_FVBNJ_G0030950	Zfp637	80	55.208
MGP_FVBNJ_G0018082	Zfp454	98	50.523	MGP_FVBNJ_G0031600	Zfp94	97	50.523
MGP_FVBNJ_G0018082	Zfp454	82	36.599	MGP_FVBNJ_G0030470	Repin1	92	35.252
MGP_FVBNJ_G0018082	Zfp454	99	44.019	MGP_FVBNJ_G0032811	E430018J23Rik	89	44.019
MGP_FVBNJ_G0018082	Zfp454	98	45.000	MGP_FVBNJ_G0032810	Zfp747	88	45.000
MGP_FVBNJ_G0018082	Zfp454	68	42.262	MGP_FVBNJ_G0029613	Gfi1	100	45.794
MGP_FVBNJ_G0018082	Zfp454	100	55.556	MGP_FVBNJ_G0026260	Zfp661	98	55.405
MGP_FVBNJ_G0018082	Zfp454	75	42.982	MGP_FVBNJ_G0024402	Zfp236	63	42.697
MGP_FVBNJ_G0018082	Zfp454	99	52.464	MGP_FVBNJ_G0031595	Zfp111	99	52.464
MGP_FVBNJ_G0018082	Zfp454	98	44.872	MGP_FVBNJ_G0031594	Zfp114	98	41.667
MGP_FVBNJ_G0018082	Zfp454	98	50.167	MGP_FVBNJ_G0031597	Zfp108	99	50.696
MGP_FVBNJ_G0018082	Zfp454	98	51.220	MGP_FVBNJ_G0031593	Zfp235	79	58.140
MGP_FVBNJ_G0018082	Zfp454	98	49.008	MGP_FVBNJ_G0031592	Zfp112	73	57.143
MGP_FVBNJ_G0018082	Zfp454	76	53.448	MGP_FVBNJ_G0031599	Zfp61	60	66.667
MGP_FVBNJ_G0018082	Zfp454	69	37.600	MGP_FVBNJ_G0033745	Zfp319	91	37.989
MGP_FVBNJ_G0018082	Zfp454	98	51.136	MGP_FVBNJ_G0034174	Zfp26	89	51.136
MGP_FVBNJ_G0018082	Zfp454	98	43.782	MGP_FVBNJ_G0026691	Zfp334	99	44.615
MGP_FVBNJ_G0018082	Zfp454	68	54.070	MGP_FVBNJ_G0020090	Zkscan4	53	54.070
MGP_FVBNJ_G0018082	Zfp454	99	53.604	MGP_FVBNJ_G0021824	Zfp251	95	51.948
MGP_FVBNJ_G0018082	Zfp454	68	38.571	MGP_FVBNJ_G0030604	Prdm5	78	38.571
MGP_FVBNJ_G0018082	Zfp454	69	39.130	MGP_FVBNJ_G0018810	Zfp652	56	38.596
MGP_FVBNJ_G0018082	Zfp454	70	35.714	MGP_FVBNJ_G0031630	Zfp574	88	37.500
MGP_FVBNJ_G0018082	Zfp454	87	48.199	MGP_FVBNJ_G0031902	Zfp715	61	57.778
MGP_FVBNJ_G0018082	Zfp454	84	56.338	MGP_FVBNJ_G0031900	Zfp141	70	56.061
MGP_FVBNJ_G0018082	Zfp454	67	51.309	MGP_FVBNJ_G0031340	Zfp628	60	49.451
MGP_FVBNJ_G0018082	Zfp454	67	42.623	MGP_FVBNJ_G0031348	Zfp865	80	36.486
MGP_FVBNJ_G0018082	Zfp454	99	50.565	MGP_FVBNJ_G0031891	-	99	50.565
MGP_FVBNJ_G0018082	Zfp454	68	45.745	MGP_FVBNJ_G0026729	Zfp64	73	35.125
MGP_FVBNJ_G0018082	Zfp454	65	36.493	MGP_FVBNJ_G0031351	Zfp784	71	36.493
MGP_FVBNJ_G0018082	Zfp454	99	49.485	MGP_FVBNJ_G0023028	Zfp677	99	49.315
MGP_FVBNJ_G0018082	Zfp454	98	48.828	MGP_FVBNJ_G0033900	Zfp1	99	48.828
MGP_FVBNJ_G0018082	Zfp454	71	57.803	MGP_FVBNJ_G0031768	Zfp420	98	59.532
MGP_FVBNJ_G0018082	Zfp454	65	42.424	MGP_FVBNJ_G0028827	Zbtb17	55	43.322
MGP_FVBNJ_G0018082	Zfp454	70	41.854	MGP_FVBNJ_G0023058	Zscan10	75	44.554
MGP_FVBNJ_G0018082	Zfp454	99	45.822	MGP_FVBNJ_G0023051	Zfp945	99	46.197
MGP_FVBNJ_G0018082	Zfp454	65	47.423	MGP_FVBNJ_G0029280	Zbtb49	63	50.000
MGP_FVBNJ_G0018082	Zfp454	98	41.509	MGP_FVBNJ_G0033529	Zfp882	99	44.110
MGP_FVBNJ_G0018082	Zfp454	68	51.095	MGP_FVBNJ_G0032808	Zfp768	51	50.523
MGP_FVBNJ_G0018082	Zfp454	100	50.847	MGP_FVBNJ_G0023030	Zfp51	96	50.847
MGP_FVBNJ_G0018082	Zfp454	98	52.692	MGP_FVBNJ_G0020511	Zfp759	100	52.692
MGP_FVBNJ_G0018082	Zfp454	86	52.000	MGP_FVBNJ_G0020510	Rslcan18	87	52.000
MGP_FVBNJ_G0018082	Zfp454	98	48.116	MGP_FVBNJ_G0018226	Zfp867	96	49.583
MGP_FVBNJ_G0018082	Zfp454	68	38.320	MGP_FVBNJ_G0018176	Zfp672	90	42.029